DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and slc6a16b

DIOPT Version :10

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001103944.1 Gene:slc6a16b / 567809 ZFINID:ZDB-GENE-070424-95 Length:676 Species:Danio rerio


Alignment Length:640 Identity:211/640 - (32%)
Similarity:320/640 - (50%) Gaps:113/640 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 RGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQML 122
            |..|.||:::.|:.||.::||||||||||||::||||||||.|::.:.|.|:|:||:|||.||.:
Zfish    33 RDGWDSKVEYFLAQVGFSVGLGNVWRFPYLCHQNGGGAFILLYVVLMALVGVPLFFLELAAGQSI 97

  Fly   123 TIGGLGVFK-IAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVN 186
            ..|.:||:: |:|...||||::.|:..::.:||.||:.|::||...|.:..:||..|....|   
Zfish    98 RQGSIGVWRHISPKLVGIGYSSCVVCFFVALYYNVIIGWSIFYLGNSFQYPLPWEKCPTEGN--- 159

  Fly   187 CVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQISHGIEEIGNIRWE 251
                               :|.|.|:.|:          |...||.|:||.|:..|:|.|...:.
Zfish   160 -------------------STVKECAASS----------PTAYFWYRKALDITDSIDETGEFNFI 195

  Fly   252 LAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSK 316
            |.|.||..|::....::||:|.:|||:||:::||||:|...|:||:||.||.|||||...|....
Zfish   196 LTGCLLAAWVIVCLAMYKGIKSSGKVMYFSSVFPYVVLLCFLIRGVTLDGASEGIKFMFYPRLEI 260

  Fly   317 LTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIG 381
            ..:.:||..|.||:||:.|||.|:::|..|||...||.::||..|..||..||:.|..|:|:|:|
Zfish   261 WADVQVWRQAATQVFFALGLGFGSVIAYSSYNPRNNNCHRDAFTVSGVNFMTSVLATLVVFAVLG 325

  Fly   382 FMA--------HEQQRPVADVAASGP--------------------------------------- 399
            |.|        ....:.:..|.:|.|                                       
Zfish   326 FRAKTIAAECVKRNLKALLKVTSSAPLPVLSINASDVESISLDEYANWYSTQGMELSISDYNITA 390

  Fly   400 --------------GLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEW 450
                          ||||:.:..|:...||||.||.|||.|||.:||.:.|.||.|.:|.:.|.:
Zfish   391 CSLEDELRQGVEETGLAFIAFTEAMTLFPGSPFWSALFFLMLLNLGLSTMFGTMAGILTPLTDTF 455

  Fly   451 PQLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGV 515
             :.||..|.||....|.:.:::||....:.|.|...:.|.|:.: ..|:.::.|:.:|:||.||.
Zfish   456 -KTLRNHKLIFTICSCTVGFVIGLVFTQRCGNYFVTMFDDYSAT-LPLIIVVIFQTISVSWVYGA 518

  Fly   516 DRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQ----------WTPVKYL--DYSYP 568
            |||.:.:|.|:.....|.:|:.|....|...||:...::::          |...|..  |..||
Zfish   519 DRFLEDLKQMLNRPVPVIYKYLWKFVCPIAMLGLLGASLLKMILKRPEYSAWNREKASKEDLPYP 583

  Fly   569 WWAHAFGWFTALSSMLYIPL-YMFWL----WKRTPGELSEKIRALVRIDEDVTRL 618
            .||.|......:.:.|.:|: |:..|    ..::|.:...:.......|.|:|.|
Zfish   584 DWALAVLIILIIIASLPVPIGYIHSLLLERLGQSPADTEARYTPCATTDTDLTPL 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 207/631 (33%)
slc6a16bNP_001103944.1 SLC6sbd-B0AT-like 33..607 CDD:271364 205/607 (34%)

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