DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and slc6a15

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001232001.1 Gene:slc6a15 / 565315 ZFINID:ZDB-GENE-050420-93 Length:741 Species:Danio rerio


Alignment Length:681 Identity:215/681 - (31%)
Similarity:336/681 - (49%) Gaps:132/681 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ESIE--MSKELGHTTSLQSSSPTTTDT-SNKQQLV-------KIEQLPDRGSWSSKMDFILSVVG 73
            ||::  :|.|.....|.:.||....|. .|||:.|       :.|:..:|.:|.||:.:||:.||
Zfish    19 ESVKDLLSNEDSCDDSFKKSSLMVGDVPQNKQKDVEEGSEEEEEEEEEERPAWGSKLQYILAQVG 83

  Fly    74 LAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVFK-IAPIFK 137
            .::||||||||||||.||||||:::||:|.|.|.|||:||:|||:||.:..|.:||:. |:|...
Zfish    84 FSVGLGNVWRFPYLCQKNGGGAYLVPYLILLLLIGIPLFFLELAVGQRIRRGSIGVWNYISPHLG 148

  Fly   138 GIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQYERKNLHCWDKI 202
            |||:|:.::..::.:||.||:.|::|||..|.:..:||..|....|..|...:.|          
Zfish   149 GIGFASCLVCFFVALYYNVIIGWSLFYFSQSFQQPLPWHECPLVKNKTNTYIEPE---------- 203

  Fly   203 INGTTQKVCSVSALNITSLELTDPVKEFWERRALQISHGIEEIGNIRWELAGTLLLVWILCYFCI 267
                    |          |.:.....:|.|.||.||..|.|.|.:.|.:...||..|.:....:
Zfish   204 --------C----------EKSSATTYYWYRVALDISDSISEGGGLNWRMTLCLLAAWTMVCLAM 250

  Fly   268 WKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFF 332
            .||::.:|||:||::|||||:|...|.|...|.|:::||.....|....:...:||.:|.||:||
Zfish   251 IKGIQSSGKVMYFSSLFPYVVLICFLARAFLLKGSVDGIIHMFTPKLEIMLEPKVWREAATQVFF 315

  Fly   333 SYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMAH------------ 385
            :.|||.|.::|..||||..||.:.||::|..:|..||:.|..|:|:|:||.|:            
Zfish   316 ALGLGFGGVIAFSSYNKRDNNCHFDAVLVSFINFFTSVLATLVVFAVLGFKANIMNAKCVEMNTK 380

  Fly   386 --------------------------EQQRPVADV-------------------------AASGP 399
                                      |..:.:.::                         |..|.
Zfish   381 KIIGFLGKEINPGLIPHHINFSQVSPEDYQQMTNIIQGVMENDYPRLGLDNCDIKEELNKAVQGT 445

  Fly   400 GLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAI 464
            ||||:.:..|:...|.||.||.:||.||:.:||.|.|.|::|.:|.|:|.:    :.|||.....
Zfish   446 GLAFIAFTEAMTHFPASPFWSVMFFLMLVNLGLGSMFGTIQGILTPIVDTF----KVRKEYLTVG 506

  Fly   465 VCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYY 529
            .|.|::.:|||.:.:.|.|...:.|.|:.: ..||.::..|.::::|.||.|:|::.:|||:|:.
Zfish   507 CCVLAFFIGLTFVQRSGNYFVAMFDDYSAT-LPLLIVVLLENIAVAWVYGTDKFFEDLKDMLGFT 570

  Fly   530 PTVWWKFCWCVTTPAICLGVFFFNIVQ----------WTP--VKYLDYSYPWWAHAFGWFTALSS 582
            |..::.:.|...||.:.||:...:::|          |..  .|....|||.|..|......:::
Zfish   571 PYRYYYYMWKFVTPVLLLGLLAASVIQLGLAPPSYSAWNQQLAKEQSLSYPPWGLAVCISLVVTA 635

  Fly   583 MLYIPLYMFWLWKRTPGELSEKIRALVRIDE 613
            :|.:|:...             :|.|..|||
Zfish   636 ILPVPVVFI-------------LRCLNIIDE 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 199/628 (32%)
slc6a15NP_001232001.1 SLC5-6-like_sbd 68..646 CDD:294310 197/623 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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