DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and si:ch211-132b12.6

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001038523.1 Gene:si:ch211-132b12.6 / 564583 ZFINID:ZDB-GENE-050420-179 Length:577 Species:Danio rerio


Alignment Length:552 Identity:258/552 - (46%)
Similarity:372/552 - (67%) Gaps:25/552 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 EQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELA 117
            |::.:||.|..|.:|:|:|.|..:|||||||||||||:||||.|::||::.:...|:|:|.:|.|
Zfish     6 EEIEERGFWGKKAEFLLAVAGNVVGLGNVWRFPYLCYRNGGGVFLIPYLVFVVTCGLPLFLLETA 70

  Fly   118 LGQMLTIGGLGVF-KIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNW 181
            :||....||:..: ::.|:.:|:|||..:...:..:||.:|||||:||...|..:.:||.:|||.
Zfish    71 MGQFTHEGGITCWHRLCPLAQGVGYAGQLTVLYSCMYYTIILAWALFYLVSSFSSQLPWVSCNNI 135

  Fly   182 WNTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQISHGIEEIG 246
            |||.|||      ||...:...|.||       ..|.||     ...||||||.|.:|.|||:||
Zfish   136 WNTDNCV------NLAAGNLTFNRTT-------LANSTS-----AATEFWERRVLSLSGGIEDIG 182

  Fly   247 NIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYII 311
            .|.||:...|:.:||:||||||||||.|||||||||.||||:|.:||:||:||||||:|:.||:.
Zfish   183 KINWEILLCLIAMWIICYFCIWKGVKSTGKVVYFTATFPYVMLLVLLIRGLTLPGALQGVVFYLY 247

  Fly   312 PNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVI 376
            |..::|.:.:||::|.||:||||.:..|.|::|||||:::||.|:|:..:|.:||.||..|||.:
Zfish   248 PEPARLADPQVWMEAGTQVFFSYSVCSGILISLGSYNQYSNNCYRDSFWLCLLNSGTSFVAGFAV 312

  Fly   377 FSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEG 441
            |||:|||||.|..||.:||.|||||||:.||.|:..:|...:|:..||.|::|:||||||..:|.
Zfish   313 FSVLGFMAHVQGVPVEEVAESGPGLAFIAYPQAMAMMPFPQLWAVCFFIMIILLGLDSQFVGIEC 377

  Fly   442 FITAIIDEWPQLLRK--RKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFF 504
            .||:::|.:|::||:  |:|:|:.::|...:...|..:|:||||:||:.|:||.:|.|||:|..|
Zfish   378 VITSVMDLFPEVLRRAGRRELFVLLLCLTCFFGQLIMVTEGGMYVFQLFDNYACNGACLLFLSVF 442

  Fly   505 ECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLD-YSYP 568
            |.::|.|.:|.::.:|.|:||....|..|:..||...||.:.|..|.:::|::||:.:.. |.||
Zfish   443 ESLAIGWLFGAEKMFDIIEDMTESRPNYWFMLCWKYLTPLVSLMSFVYSMVRYTPLTFNRWYVYP 507

  Fly   569 WWAHAFGWFTALSSMLYIP---LYMFWLWKRT 597
            .||:|.||..||||:|.:|   |...|..|.|
Zfish   508 DWAYALGWLLALSSILLVPGWALGQMWAGKGT 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 257/547 (47%)
si:ch211-132b12.6NP_001038523.1 SLC6sbd-TauT-like 11..550 CDD:271387 257/547 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D145627at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100347
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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