DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and si:ch211-225b11.1

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001103931.1 Gene:si:ch211-225b11.1 / 561694 ZFINID:ZDB-GENE-060531-39 Length:609 Species:Danio rerio


Alignment Length:615 Identity:257/615 - (41%)
Similarity:387/615 - (62%) Gaps:40/615 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 KELGHTTSLQSSSPTTTDTSNKQQLVKIEQ--LPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYL 87
            ::||.....:..:.||||.:...:|.|:||  ...|.:|..:::|:|:.:|.|:|||||||||||
Zfish    19 QQLGEGKEEEELARTTTDRAEATRLAKVEQQAAEPRETWGRRLEFVLATIGYAVGLGNVWRFPYL 83

  Fly    88 CYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGGL-GVFKIAPIFKGIGYAAAVMSCWMN 151
            ||::|||||::||:|.|||.|||:.|||..:||...:|.: .:.:|.|:|||:|.|..|:|..:.
Zfish    84 CYRSGGGAFLIPYMIMLFLCGIPLLFMEFTVGQYTRLGPVHALAQICPLFKGVGLATVVISYVLC 148

  Fly   152 VYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTV-NCVSQYERKNLHCWDKIINGTTQKVCSVSA 215
            .||.|::.||::|...|....:||::|||.|||| ||.:.:.....|                  
Zfish   149 TYYNVLMTWALYYLLHSFSPSLPWQSCNNTWNTVANCSTGFPGNATH------------------ 195

  Fly   216 LNITSLELTDPVKEFWERRALQISHGIEEIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYF 280
                   |....::|::.:.|:::.|||..|.:||||.|.|:|.|.:.||||:||||.|||||||
Zfish   196 -------LQSASQQFFDHKVLEMTSGIERAGGVRWELFGLLVLAWGIVYFCIFKGVKSTGKVVYF 253

  Fly   281 TALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALG 345
            ||.|||.:|..|||..:.||||..||.|:::||:|||...:||::|..|||.|.|:..|:::::.
Zfish   254 TATFPYFILFALLVNNVQLPGAKNGILFFLMPNWSKLLEVQVWVNAAAQIFNSIGISFGSMISMA 318

  Fly   346 SYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAV 410
            ||||:.||:.:|..||...||:||:.|||||||.||:|||....||.|:|..||||.|:|||...
Zfish   319 SYNKYNNNILRDTFIVSLANSATSIVAGFVIFSAIGYMAHIHNLPVDDIATDGPGLVFVVYPEVF 383

  Fly   411 LQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQ---LLRKRKEIFIAIVCALSYLV 472
            ..:|.|.:|:.|||.|||.:||||||..:|..:|.|:|.:.:   .:.||||:.:..||:..:|:
Zfish   384 STMPVSQLWAPLFFIMLLCLGLDSQFAMVEVAVTFIMDGFGRKALKVFKRKELIVLAVCSFGFLL 448

  Fly   473 GLTCITQGGMYIFQILDSY--AVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWK 535
            |:..||:||:|:||::|.|  .||   |::|.|||.::::..:||.|....:::|:|..|.::::
Zfish   449 GIPHITRGGIYVFQLMDHYTAVVS---LMFLAFFEVLAVTLIFGVKRLSVMVENMLGKKPNLFFR 510

  Fly   536 FCWCVTTPAICLGVFFFNIVQWTPVKY-LDYSYPWWAHAFGWFTALSSMLYIPL-YMFWLWKRTP 598
            .||...:|.:.||:...:|||:||.:| ..|:||.||...|||.:|.|:::||| .:..|| .|.
Zfish   511 ICWQYLSPMLVLGILISSIVQYTPARYGKSYTYPLWAELLGWFISLVSIIWIPLGALHELW-TTE 574

  Fly   599 GELSEKIRALVRIDEDVTRLREKMLREAYA 628
            |.|.::::..:....|:..:.||...|:.|
Zfish   575 GSLLQRLKKSITPTVDLESVSEKPSTESIA 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 242/561 (43%)
si:ch211-225b11.1NP_001103931.1 SLC5-6-like_sbd 54..587 CDD:294310 242/561 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49243
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.930

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