DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gat and SLC6A20

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001372612.1 Gene:SLC6A20 / 54716 HGNCID:30927 Length:603 Species:Homo sapiens


Alignment Length:614 Identity:201/614 - (32%)
Similarity:297/614 - (48%) Gaps:118/614 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 RGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQML 122
            |..|::.:.|:.:.:..|:||||||||||||...|||:|::||||.|.:.|:|:.::|||:||.:
Human     5 RPLWANSLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYIIMLIVEGMPLLYLELAVGQRM 69

  Fly   123 TIGGLGVFK-IAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVN 186
            ..|.:|.:: |:|...|:|.|:.|:|.::::||.||.|||.:|.|.|.:..:||..|.       
Human    70 RQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWAFWYLFHSFQDPLPWSVCP------- 127

  Fly   187 CVSQYERKNLHCWDKIINGTTQKVCSVSALNIT----SLELTDPVKEFWERRALQISHGIEEIGN 247
                            :||           |.|    ..|.....:.||.|:.|.||..::|.|.
Human   128 ----------------LNG-----------NHTGYDEECEKASSTQYFWYRKTLNISPSLQENGG 165

  Fly   248 IRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIP 312
            ::||.|..|||.|::.|.||.:|.:.|||||||||..||.:|.|.|:||:||.||..|:.:...|
Human   166 VQWEPALCLLLAWLVVYLCILRGTESTGKVVYFTASLPYCVLIIYLIRGLTLHGATNGLMYMFTP 230

  Fly   313 NFS-----------KLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNS 366
            ..|           :|.|.:.||:|.||||||.|||.|:|:|..|||:.:||..|.|:||..:||
Human   231 KGSSALSLLAFQIEQLANPKAWINAATQIFFSLGLGFGSLIAFASYNEPSNNCQKHAIIVSLINS 295

  Fly   367 STSMFAGFVIFSVIGFMA---------------------------------------------HE 386
            .||:||..|.||:.||.|                                             :.
Human   296 FTSIFASIVTFSIYGFKATFNYENCLKKVSLLLTNTFDLEDGFLTASNLEQVKGYLASAYPSKYS 360

  Fly   387 QQRP---------VADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGF 442
            :..|         ..|.|..|.||||:||..|:..:..|.:||.|:|||||::|:.|........
Human   361 EMFPQIKNCSLESELDTAVQGTGLAFIVYTEAIKNMEVSQLWSVLYFFMLLMLGIGSMLGNTAAI 425

  Fly   443 ITAIIDEWPQLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECV 507
            :|.:.|.........||....:||.::..:|:....:.|.|.|.|.:.||.: ..||.::..|.:
Human   426 LTPLTDSKIISSHLPKEAISGLVCLVNCAIGMVFTMEAGNYWFDIFNDYAAT-LSLLLIVLVETI 489

  Fly   508 SISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDY------- 565
            ::.:.||:.||...:|.|.|...:.:||..|...:|.:.:.:|.|.:..:.....|.|       
Human   490 AVCYVYGLRRFESDLKAMTGRAVSWYWKVMWAGVSPLLIVSLFVFYLSDYILTGTLKYQAWDASQ 554

  Fly   566 ------SYPWWAHAFGWFTALSSMLYIPL 588
                  .||.:|.|.......||.:.|||
Human   555 GQLVTKDYPAYALAVIGLLVASSTMCIPL 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 201/614 (33%)
SLC6A20NP_001372612.1 SLC6sbd_SIT1 2..588 CDD:271401 201/614 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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