DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and blot

DIOPT Version :10

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster


Alignment Length:611 Identity:138/611 - (22%)
Similarity:245/611 - (40%) Gaps:141/611 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NSASDGDGGGDVCKHESIEMSKELGHTTSLQSSSPTTTDTSNKQQLVKIEQLPDRGSWSSKMDFI 68
            |:.|:..||.....|:::  ||..    |:.:|:...|..||.:.|..:|...::.:..|....:
  Fly   164 NTLSEIQGGYHDMDHDAV--SKNF----SISASAHNITTASNAKLLPAVEDESNKQTKCSVFRGL 222

  Fly    69 LSVVGLAIGLGNVWRFP-----YLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLG 128
            :..:.|.:...||.|||     |      |.|:::||::.|||.|:||..:|:::||.|..|...
  Fly   223 VLCLCLNLSYANVVRFPRELDRY------GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAH 281

  Fly   129 VFKIAPIFKGI----GYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVNCVS 189
            .::.:|||||.    .:|:.:.:.|:::..::.||    |..|....|:|:|.|..         
  Fly   282 TWRASPIFKGACMISRFASWLSAIWVSLQAVLALA----YIGMFASNDLPFRECAG--------- 333

  Fly   190 QYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQISHGIEEIGNIRWELAG 254
               ...|.....::.||:.:.|         |:||. :..||..   .:..|:         ||.
  Fly   334 ---PVKLRLSGYLLTGTSGQEC---------LQLTF-LTPFWRN---PLYFGL---------LAA 373

  Fly   255 TLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSK--- 316
            .|:.:||:...|. ...|...:.::...|...|||       .||.|      :.:..:||:   
  Fly   374 GLIGLWIVVMLCT-HNAKILRRSIFVFGLVGLVLL-------CTLTG------WEVRNSFSRHYF 424

  Fly   317 ----------LTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVN-----S 366
                      |..|.:|.:|:.|:.||...|.|.|..:.....:..:..:.:::....|     .
  Fly   425 PELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFNLLINAI 489

  Fly   367 STSMFAGFVIFSVIGFMAHEQQRPVADV-----AASGPGLAFL---VYPSAVLQLPGSPMWSCLF 423
            :.::|......|..||...|:.:|:..:     ..|..|.:.|   :.||             |.
  Fly   490 AVTLFMVQFDLSSNGFQNMEELKPLTAIYDRVLNGSREGDSHLLQHLVPS-------------LI 541

  Fly   424 FFMLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQIL 488
            :.:::|..:.|        ||..:....:|:.:|...   ::|.:..:|.:.........|.::|
  Fly   542 YALIILSAMVS--------ITVAVYTSTRLVPRRPNY---VICLIGLVVAVISFAAPKFLIARVL 595

  Fly   489 DSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFN 553
            ||..| |..::..:.||.::|:|.||....|..::..||......|.:.| |..|||..|:    
  Fly   596 DSRLV-GTMVVTALVFELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWLW-VICPAILTGI---- 654

  Fly   554 IVQWTP--------VKYLDYSYPWWA 571
            :|.|..        .:||    |.||
  Fly   655 LVWWCADDDQYDLLAEYL----PRWA 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 124/557 (22%)
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 117/527 (22%)

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