DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and CG4476

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster


Alignment Length:615 Identity:202/615 - (32%)
Similarity:324/615 - (52%) Gaps:65/615 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IEMSKELGHTTSLQSSS--PTTTDTSNKQQLVKIEQLPD---RGSWSSKMDFILSVVGLAIGLGN 80
            :|.|:..|...:|...|  |...::|        |..||   |.:|.|.::|::|.:.|::||||
  Fly    17 LETSRCAGSGEALLKPSLLPMALESS--------ELSPDRKARDNWGSSLEFLMSCIALSVGLGN 73

  Fly    81 VWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVFKIAPIFKGIGYAAAV 145
            |||||:...:||||||::||::.||:.|.|:::||:.|||..:.|.:.||..||:.:|:|||..:
  Fly    74 VWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLL 138

  Fly   146 MSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVNCVS---------QYERKNLHCWDK 201
            ....:..||..::|..:.|||.|..:::||..|...|.. .|||         |..|.       
  Fly   139 ALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWGD-GCVSASGGQPLQGQLSRN------- 195

  Fly   202 IINGTTQKVCSVSALNIT-SLELTDPVKEFWERRALQISHGIEEIGNIRWELAGTLLLVWILCYF 265
             .:.:||.......||.| |||                    |.||.....||..|.:.|:....
  Fly   196 -FSSSTQLYLQRIVLNETDSLE--------------------EGIGYPSGSLALMLGISWLTVTL 239

  Fly   266 CIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQI 330
            .|.:|||.:||..|..||||||::.|||||.:|||||.:|:.:::.|.:.||...:||.:||||:
  Fly   240 IIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQV 304

  Fly   331 FFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMAHEQ-QRPVADV 394
            |||..:..|.::...|||:|.:|||:||.||.|:::.||:.:|.:||.::|.:|||. .:.:|.|
  Fly   305 FFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGTKDIASV 369

  Fly   395 AASGPGLAFLVYPSAVLQLPGSP-MWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRK 458
            ..:||||||:.||.|:.:....| ::|.|||.||.::|:.|....:...:|.:.|   |.:..:.
  Fly   370 VKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKD---QFVNVKL 431

  Fly   459 EIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIK 523
            .|.:..:..:.:||||..||.||.:|..::|.:.|: |..|....||.:::.|.||..|.....:
  Fly   432 WIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVT-FVSLVSAIFELIAVGWIYGTKRLCQDAE 495

  Fly   524 DMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDYSYPWWAHAFGWFTALSSMLYIPL 588
            .|:....:.:::.||.:.||.:.|.:..::::...|:.|....:|......||  .:|..:...|
  Fly   496 YMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYNGQEFPLVYRVVGW--CVSGCIIGQL 558

  Fly   589 YMFWL----WKRTPGELSEKIRALVRIDED 614
            : :|.    :|:..|.|..:|...::...|
  Fly   559 F-YWAGYANFKQPKGSLKSRINNSIKPHSD 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 191/568 (34%)
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 178/506 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440712
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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