DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and Slc6a16

DIOPT Version :10

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001311464.1 Gene:Slc6a16 / 381884 MGIID:2685930 Length:742 Species:Mus musculus


Alignment Length:654 Identity:160/654 - (24%)
Similarity:276/654 - (42%) Gaps:123/654 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ELGHTTSLQSSSPTTTDTSNKQQLVKIEQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYK 90
            ||...|:|:..|   ::..|:......|..|.|..|:||::::|:::...:....|.||......
Mouse    96 ELATVTTLEQES---SELVNRMSRESSEGYPPRQLWASKVEYMLAIMSYLLMPSGVLRFASGWVH 157

  Fly    91 NGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVFK-IAPIFKGIGYAAAVMSCWM-NVY 153
            .|..:|.:.||:.|...|||:.|:|:|:||........::| ::|.|.|:|| :.||.|:: |.|
Mouse   158 KGSCSFFIAYILMLLGIGIPLLFLEMAVGQRAQQSSADMWKNLSPWFGGVGY-SMVMVCFITNTY 221

  Fly   154 YIVILAWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNI 218
            ..|..:|.:||........|||..|....|:.|...:.|:...:.:                   
Mouse   222 LNVFNSWILFYMSHIFYFVVPWDQCPLQRNSSNFDPECEQATSYTY------------------- 267

  Fly   219 TSLELTDPVKEFWERRALQISHGIEEIGNIRWELAGTLLLVW-ILCYFCIWKGVKWTGKVVYFTA 282
                       ||.|:.|:.|..||:.|...:.|..:|.|.: ::|.|.: .|:|..|||::...
Mouse   268 -----------FWYRKTLKASDRIEDGGQPSFSLGMSLFLSFCLICAFLV-NGIKSIGKVLFVLL 320

  Fly   283 LFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSY 347
            |.||.::...|:|.:::.||..|:|..:|...:.:::..:|..|..|:.|..|||.|.:|:|.|:
Mouse   321 LVPYSIIVCFLIRTLSMDGAEYGLKHLLILKVASISDLTIWCHAGIQVLFDIGLGFGPIVSLASH 385

  Fly   348 NKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMA--------HEQQRPVADVAASG------ 398
            ....||...||.::......|.:.....:.|::||.|        .:.|..:..:.|.|      
Mouse   386 VPDFNNCMADAFLMALFKIITLLMTTPFLLSILGFWATTTTHHCCKKNQETLLRLVAQGILPPDA 450

  Fly   399 -----------------------------------------------PGLAFLVYPSAVLQLPGS 416
                                                           |...||::...:..||||
Mouse   451 QPPDLSGNPTSNYNSWLSSLPPPLRSAVLSVVPECSVQKQFLKIKDNPRFLFLIFTEVISLLPGS 515

  Fly   417 PMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIVCALSYLVGLTCITQGG 481
            ..|..|||.:||.:||.|....|.|.:..:.|.:| ..|::..:.|..|....:|.||..|...|
Mouse   516 GFWIVLFFLLLLTLGLCSNLMFMLGNVLTLQDTFP-FCRRQPRLLIVCVSMAMFLCGLIFIQPSG 579

  Fly   482 MYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFC---WCVTTP 543
            :|.|.:|....|: ..::.:|..|.::::|.||.|||   :.||:.......:..|   ||..:|
Mouse   580 IYYFSLLSECWVA-VPVIIIIICENLAVAWAYGADRF---LADMVALLGRPIFSGCGWLWCYISP 640

  Fly   544 AICLGVF---FFNIVQWTPVKYLDYS----------YPWWAHAFGWFTALSSMLYIPLYMFWLWK 595
            .:.||:.   |..:|: .|:.|..:.          :|.|:...  ...|:..:.:|:..::::.
Mouse   641 MVVLGLLTSVFVYLVK-GPLVYFAWDSSTSKEVVRVFPEWSKIL--IAGLTVFVLMPIPAYFVYC 702

  Fly   596 RTPG 599
            .|.|
Mouse   703 LTLG 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 152/622 (24%)
Slc6a16NP_001311464.1 SLC5-6-like_sbd 125..694 CDD:444915 149/608 (25%)

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