DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and bdg

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster


Alignment Length:750 Identity:161/750 - (21%)
Similarity:281/750 - (37%) Gaps:204/750 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SDGDGGGDVCKHESIEMSKE---LGHTTSLQSSSPTTTDTSNKQQLVKIEQLPDRGSWSSKMDFI 68
            ||....|.    .|.|..:|   :..||...:||.|..:..::.||:..|:......|.......
  Fly   444 SDSSSSGS----SSAEHDQEPDPVQTTTMCSASSTTPLEPLHQLQLLLREKCGFNSQWPHAGSRT 504

  Fly    69 LSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVFKIA 133
            |:::|..:|:.|:.||..|.. |.||.|:|.:::...:.|||:.::::.||..:..|.:.::||:
  Fly   505 LALIGCTLGVFNMCRFAVLTI-NFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMWKIS 568

  Fly   134 PIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNW-WNTVNCVSQYERKNLH 197
            ||..|:|.|..:..|::.:|..|.|||.:.|    :|...|....:.: |..:....:|:     
  Fly   569 PICAGVGIALVMQQCFLALYSTVSLAWILVY----LRDVFPTAARSGYRWQEMAFPYRYD----- 624

  Fly   198 CWDKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQISH--------GIEEIGNIRWELAG 254
                             |.|.|. .||..|.|::....||..|        ||....|.| :||.
  Fly   625 -----------------ASNATG-NLTQTVAEYFNVVVLQRLHLANHPDASGIRFHVNDR-QLAF 670

  Fly   255 TLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITL--PGALEGIKFYIIPNFSK- 316
            .|.|:|...:..:.||:|..||:.|.....|.|.|.::..:.:.:  |..::.|  :...:|.. 
  Fly   671 YLALIWAAVFLILCKGLKSLGKLAYIIYTLPLVALAVVTAKFVYVVDPSRIQNI--FAASDFDDF 733

  Fly   317 LTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNN---VYKDALIVCTVNSSTSMFAGFVIFS 378
            |.||..|..|..:.|.::||...:::|:.|.:....|   :.:||:::             |:|:
  Fly   734 LVNSNSWTAATQETFLTWGLLGASVIAITSRSHTNANKAALRRDAILL-------------VLFT 785

  Fly   379 VI--GFMA--------------------------------------------------------- 384
            :|  |.||                                                         
  Fly   786 LIGLGLMALLALCCAQILWQHGYVYVPGSFENPDCYTSIYSLQSNTNPYLLSYPRSLIPHYSSFI 850

  Fly   385 ---HEQQRPVADVAASGPGLAFL--VYPSAVLQLPG---SPMWSCLFFFMLLLIGLDSQFCTMEG 441
               :.:.|.:..|.:....|.|:  ::| |||.|..   |.:|:.:.|......|| :|.|.|..
  Fly   851 GETYRRNRTMIHVESGFQALRFISEIFP-AVLSLASDSISWVWAAVAFATFAGFGL-AQLCVMWK 913

  Fly   442 FITAIIDEWPQLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFEC 506
            .|::.:.        .....:.:.|....|:.:...|:.|:.|...:| :.:.|   .|.|    
  Fly   914 PISSALG--------NSTSSVLLSCVTGLLLSIPFATEMGISILYYVD-FLLGG---SWFI---- 962

  Fly   507 VSISW---CYGV----DRFYDG---IKDMIGYYPTVWWKFC----------WCVTTPAICLGVFF 551
             .|.|   .:||    .|.|:|   :.|:         :.|          |.|..|   :|:..
  Fly   963 -PIIWTAQIFGVFLIRGRPYNGDDLVNDL---------RLCGSMSAFLALSWNVLLP---IGLIT 1014

  Fly   552 FNIVQ-----------WTPVKYLDYSYPWWAHAFGWFTALSSMLYIP----LYMFWLWKRTPGEL 601
            .::|.           |....|..|    |:...|....:..:|.||    :.::......|.::
  Fly  1015 LSVVDYKASLSNQFYYWRGKSYFTY----WSRKMGSLIQIGVLLVIPVTAIIQIYRYLAHGPPDI 1075

  Fly   602 SEKIRALVRIDEDVTRLREKMLREAYAKEIEFNSL 636
            .|:|:.|.|..|:....|....|:. |.:...|:|
  Fly  1076 LERIQLLYRPPEEGEEPRRPSARQT-ASQSRRNAL 1109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 140/669 (21%)
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 117/537 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.000

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