DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gat and SLC6A18

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_872438.2 Gene:SLC6A18 / 348932 HGNCID:26441 Length:628 Species:Homo sapiens


Alignment Length:606 Identity:215/606 - (35%)
Similarity:311/606 - (51%) Gaps:112/606 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 DRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQM 121
            :|..|.:|..::||..|.|:||||:|||||||...|||||::||:|.|...|||:|.:|||:||.
Human    17 ERPKWDNKAQYLLSCTGFAVGLGNIWRFPYLCQTYGGGAFLIPYVIALVFEGIPIFHVELAIGQR 81

  Fly   122 LTIGGLGVF-KIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTV 185
            |..|.:||: .|:|...|:|.....:|..:::||..|:||.::|...|.:..:||.:|....|..
Human    82 LRKGSVGVWTAISPYLSGVGLGCVTLSFLISLYYNTIVAWVLWYLLNSFQHPLPWSSCPPDLNRT 146

  Fly   186 NCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQISHGIEEIGNIRW 250
            ..|.:                    |..|:          .|..||.|:.|.|:..|.:.|:|:|
Human   147 GFVEE--------------------CQGSS----------AVSYFWYRQTLNITADINDSGSIQW 181

  Fly   251 ELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFS 315
            .|...|...|.:.|.|:.:|::.||||:||||||||::|||.|:||:|||||.:|:.:...||..
Human   182 WLLICLAASWAVVYMCVIRGIETTGKVIYFTALFPYLVLTIFLIRGLTLPGATKGLIYLFTPNMH 246

  Fly   316 KLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVI 380
            .|.|..||:||.||||||..|..|..:|..|||...|:..|||:::..||..||::|...:|||:
Human   247 ILQNPRVWLDAATQIFFSLSLAFGGHIAFASYNSPRNDCQKDAVVIALVNRMTSLYASIAVFSVL 311

  Fly   381 GFMA-----H----------------EQ-----------------------QRPV--------AD 393
            ||.|     |                ||                       |.|:        .|
Human   312 GFKATNDYEHCLDRNILSLINDFDFPEQSISRDDYPAVLMHLNATWPKRVAQLPLKACLLEDFLD 376

  Fly   394 VAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIID-----EWPQL 453
            .:||||||||:|:....|.:||:|:|:.|||.||..:||.:.|.|:|..||.::|     .|.. 
Human   377 KSASGPGLAFVVFTETDLHMPGAPVWAMLFFGMLFTLGLSTMFGTVEAVITPLLDVGVLPRWVP- 440

  Fly   454 LRKRKEIFIAIVCALSYLVGLTCIT-QGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDR 517
                ||....:||.:.:| ..||.| |.|.|..:|.|::|.|. .||.|.|.|.|.:.:.||:.|
Human   441 ----KEALTGLVCLVCFL-SATCFTLQSGNYWLEIFDNFAASP-NLLMLAFLEVVGVVYVYGMKR 499

  Fly   518 FYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVF--FFNIVQWTPVKYLDYS-------------Y 567
            |.|.|..|.|..|:.:|:..|.|.:| :.|.:|  :..::.|.|::|..::             |
Human   500 FCDDIAWMTGRRPSPYWRLTWRVVSP-LLLTIFVAYIILLFWKPLRYKAWNPKYELFPSRQEKLY 563

  Fly   568 PWWAHAFGWFTALSSMLYIPL 588
            |.||.|.....:|..:|::|:
Human   564 PGWARAACVLLSLLPVLWVPV 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 215/605 (36%)
SLC6A18NP_872438.2 SLC6sbd_B0AT3 17..591 CDD:212086 215/606 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 602..628
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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