DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gat and CG15279

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster


Alignment Length:644 Identity:219/644 - (34%)
Similarity:345/644 - (53%) Gaps:46/644 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 YTNSASDGDGGGDVCKHESIEMSKELGHTTSLQSSSPTTTDTSNKQQLVKIEQLPDRGSWSSKMD 66
            :.|.|..||.|            :....|..:.::||...|.|:.|:..|:.:  :|.:|...::
  Fly     8 HQNLAFVGDDG------------RSTASTVEISTNSPALRDNSDDQEAAKVPE--ERATWGKGVE 58

  Fly    67 FILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVFK 131
            |::|.:.:::|||||||||:....||||||::||:|.|||.|.|::::|:.:||..:.|.:.||.
  Fly    59 FLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYYLEMVIGQFSSRGSVKVFD 123

  Fly   132 IAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVNCV-------- 188
            :.|..||:|...|.....::.||..::|....||..|.|..:||.||...|. ::|:        
  Fly   124 LCPAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIESFRNPLPWSTCRAEWG-IHCINSAPDASN 187

  Fly   189 -SQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQISHGIEE-IGNIRWE 251
             ||.|..:....:..:.....:|       |||.|.      ::.:..|.....||| ||...||
  Fly   188 WSQLESNDQRPQNYTMKSQNDRV-------ITSSEW------YFVKEVLHEKPNIEEGIGLPNWE 239

  Fly   252 LAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSK 316
            |...|.:.|...:|.|.:|||.:||..||.||||||::.:||||.:||||:::||.::|.|.:.|
  Fly   240 LVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSIDGIYYFIKPQWGK 304

  Fly   317 LTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIG 381
            :.:.:||..||||.|:|..:..|.::...|:|||.:||::||.||..:::.||:.|||.||.::|
  Fly   305 ILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDTMTSLLAGFTIFGILG 369

  Fly   382 FMAHE-QQRPVADVAASGPGLAFLVYPSAVLQLPGSP-MWSCLFFFMLLLIGLDSQFCTMEGFIT 444
            .:||| ....:..|...|.||||:.||.|:.:....| ::|.|||.||.::|:.|........:|
  Fly   370 HLAHEIGTDDIGSVVKGGAGLAFISYPDAIAKFKNLPQIFSVLFFLMLFVLGIGSNIAMTSCSVT 434

  Fly   445 AIIDEWPQLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSI 509
            ||.|.:|...:.:..:.||:|   |:.:||..||.||.|:..::|.:..|...|: |...|..:|
  Fly   435 AIRDRFPNFGQWQCSLLIAVV---SFFIGLMYITPGGQYMLTLVDFFGASMIALV-LGIAELYTI 495

  Fly   510 SWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDYSYPWWAHAF 574
            .|.||.||....|:.|:|....::|:.||.:.||.|...:..:....:.|:.|.:..||.|:::.
  Fly   496 GWIYGTDRLCKDIEFMLGRKVGLYWRLCWSIITPLIMTVILIYFYATYQPLTYNNIVYPNWSYSI 560

  Fly   575 GWFTALSSMLYIPLYMFWLWKRTPGE-LSEKIRALVRIDEDVTRLREKMLREAYAKEIE 632
            ||......:|.:|::|.....|.||: |..|||......:: ....:.:|||.|.||||
  Fly   561 GWLITAFGILQLPIWMIVAIVRDPGQTLGAKIRGAFTPKKN-WGPSDPLLREQYHKEIE 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 199/565 (35%)
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 199/565 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440709
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.