DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and CG13796

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster


Alignment Length:630 Identity:137/630 - (21%)
Similarity:244/630 - (38%) Gaps:151/630 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 RGSWSSKMDFI---------------LSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLA 107
            ||.|:...||.               ||..|:..|              |...||:.|::.:...
  Fly    84 RGRWAKSADFYFASCTHAFSSLIFSELSTFGILHG--------------GWLLFIIAYLMGMLFY 134

  Fly   108 GIPMFFMELALGQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRAD 172
            .:|:|.::..|||..:.|.:..|::||||||||||..:::.....||.:.....:.|...|:...
  Fly   135 SLPIFLIQAFLGQFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPV 199

  Fly   173 VPWRTCNNWWNTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDP--VKEFWERRA 235
            :||.:|||.|||..| |.:|..::..:                       ..||  ..||:....
  Fly   200 IPWMSCNNSWNTQEC-SLHENYDVDDY-----------------------RVDPHSTVEFFRSMI 240

  Fly   236 LQISHGIEEIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVV---------YFTALFPYVLLTI 291
            ...:.|...: :|.|.:...:|.:|::....:.|.|.:.|||:         :|.|:|.|    :
  Fly   241 ASTAKGSTSM-SISWSMLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLY----L 300

  Fly   292 LLVRGITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFF---SYGLGLGTLVALGSYNKFTNN 353
            |:...:|    .:.:.:|.:|.....  ..:...|.|.:..   :.|.|.|:::.|.|||.|..:
  Fly   301 LIHEQVT----FDTLHYYWMPQLDSF--DSILATARTALLMAGGALGPGWGSIITLSSYNNFRRD 359

  Fly   354 VYKDALIVCTVNSSTSMFAGFVIFSV--------IGFM------AHEQQRPVADVAASGPGLAFL 404
            ..:.::.||..:.:..:. |.:..:|        :|.|      .|..|            ..:|
  Fly   360 AERLSIWVCLTHITIGLM-GLLCCNVAHDHFEDHVGMMPLHVDEKHHMQ------------FLYL 411

  Fly   405 VYPSAVLQLPGSP-MWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIVCAL 468
            .:.....:...:| :|:.|||.|:.|..|.:....|...|||:.||: :.||.|:   |.::.:|
  Fly   412 CFSYLFGRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEF-ETLRSRR---ILVISSL 472

  Fly   469 SYLVGLTCITQGGMYI--------------FQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFY 519
            .:     |:|...:|.              ..:.....:||..:|        ..:|.||..||.
  Fly   473 VF-----CLTASSVYFCTQLGFSQLTQLPNLAVFTHLLISGILVL--------MTTWVYGRVRFQ 524

  Fly   520 DGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDYSYPWWAHAFGWFTALSSML 584
            ..::.|:|...:.:..|.....|| |.||:..|.:........:.....:.:......||:|   
  Fly   525 CDLQFMLGKTISSFKIFFIRFATP-IFLGLCLFQLTYLFTRDRIHDVLIYVSQGLILLTAIS--- 585

  Fly   585 YIPLYMFWLWKRTPGELSEKIRALVR------IDEDVTRLREKML 623
                ||.:...||.|:..::::..:.      :|.|..|..|:::
  Fly   586 ----YMVYKVCRTNGDWRQRLQQCLAPHDWHPVDADNRRFYEEIM 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 133/616 (22%)
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 123/559 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440722
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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