DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and CG13794

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_609137.2 Gene:CG13794 / 34048 FlyBaseID:FBgn0031936 Length:595 Species:Drosophila melanogaster


Alignment Length:607 Identity:138/607 - (22%)
Similarity:259/607 - (42%) Gaps:112/607 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PD--RGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELAL 118
            ||  ||.|....|:|.:..|||:.| :::...|..:.:.|...:|||::.:.:..:|:..:...:
  Fly    16 PDLKRGKWDKPTDYIFACFGLALKL-DIFVASYWFFFDMGIFGMLPYLVYMVIYLVPIMVIHSFM 79

  Fly   119 GQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTC---NN 180
            ||..:.|.:..|:::|.|||:||.:..::..|.:||.:..|..:.:...|.|..:|| :|   .:
  Fly    80 GQFSSSGFISAFRLSPFFKGMGYVSVFLTISMLIYYSIFAAVPLLFMINSFRPTLPW-SCEGFKS 143

  Fly   181 WWN-------TVNCV------------SQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDP 226
            |:|       |.|..            :.:.|.:.|            |.||    :..|:..:.
  Fly   144 WYNESDGKMTTCNMTISEDLTDNSDNNTDFHRPHFH------------VPSV----LYFLKHFES 192

  Fly   227 VKEFWERRALQISHGIEEIGNIR------WELAGTLLLVWILCYFCIWK--GVKWTGKVVYFTAL 283
            |:|             |...::|      |......:|||.:..|..:|  .....||.:.:..:
  Fly   193 VQE-------------ENYSDLRQDYDLSWRFVSLFVLVWAMVAFIFYKFSETAMFGKFIRYMVI 244

  Fly   284 FPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEVWIDAV-TQIFFSYGLGLGTLVALGSY 347
            ...:||.:...|.:.|||||.|::.|:.|:..::.   :.|.:. ..:..::|.|.|:::||.|:
  Fly   245 GTLILLLVCFGRFLFLPGALLGLRKYVTPSPDEIA---MGIGSTFVMVLHAFGAGWGSVIALSSF 306

  Fly   348 NKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMA-HEQQRPV------------ADVAASGP 399
            |.|..::...:.|:    |...:|. |.:|.::.:|. |.....:            |...:|..
  Fly   307 NGFKTDIMSYSWII----SFGQIFI-FTMFGLVSYMLDHYYNEGIEGSFDKQVLTHWALYLSSAT 366

  Fly   400 GLAFLVYPSAVLQLPGSPMWSCLFFFMLL---LIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIF 461
            .|:.|.:|:         :|:.:::.|||   ||.:.:|..|:   :.::.||:..|..:::|:.
  Fly   367 ALSSLGWPN---------LWTFIYYTMLLMAALIVITTQIFTV---LQSLFDEFEVLRVRKQEVT 419

  Fly   462 IAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMI 526
            ..::..::......| |..|:..|..|...|:....||.|:..  :.:.|.||.:||...|:.|:
  Fly   420 FGLIGGIAVCSFYFC-TNHGITFFSALALDAIFSHSLLHLLLL--LVVLWIYGRERFQRDIEFML 481

  Fly   527 GYYPTVWWK-FCWCVTTPAICLGVFFFNIVQWTPVKYLDYSYPWWAHAFGW--FTALSSMLYIPL 588
            | .|...|| :......|.|.:......|:    |.|:::.|. .|...|.  ...:..:|.||.
  Fly   482 G-QPFASWKVYILRFIAPIILIICLVVGIL----VCYMEHIYS-SAIVLGMSIILVILPILAIPG 540

  Fly   589 YMFWLWKRTPGELSEKIRALVR 610
            |..:...|:.|...|:.:...|
  Fly   541 YGIYYIYRSTGSFCERFKRTCR 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 136/603 (23%)
CG13794NP_609137.2 SLC5-6-like_sbd 27..509 CDD:271356 119/536 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440719
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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