DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and CG13793

DIOPT Version :10

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster


Alignment Length:590 Identity:153/590 - (25%)
Similarity:271/590 - (45%) Gaps:87/590 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PD--RGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELAL 118
            ||  ||:|....|:|.:..|||:.| :::...:..:.|.|...::||::.:.:..:|:..:...:
  Fly     8 PDLNRGNWEKPTDYIFACFGLALKL-DIFVASFWFFFNTGIFGMVPYLMYMVIYLVPIMVIHSYM 71

  Fly   119 GQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWN 183
            ||..:.|.:..|:::|:|||:||.:..::..:.:||.:..|..:.:...|.|..:|| :|..:  
  Fly    72 GQFSSSGFISAFRLSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPW-SCEGF-- 133

  Fly   184 TVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTD---PVKEFWERRALQISHGIEEI 245
                 ..::...:..| .|.|.|..:..:....|.|...:|:   |...:::      || .|..
  Fly   134 -----KSWQNDTIAKW-SICNATIAEEVAKETENDTYFYITNIHVPSVLYFK------SH-FESF 185

  Fly   246 GN--------IRWELAGTLLLVWILCYFCIWK---GVKWTGKVVYFTALFPYVLLTILLVRGITL 299
            .|        |.|.|:|...|||....|..:|   ..|: ||.:.:..:....||.:..||.:.|
  Fly   186 QNDSELNDYEISWHLSGLFALVWATIAFIFYKFSEPAKF-GKCIRYMVIGTVALLLVCFVRFLFL 249

  Fly   300 PGALEGIKFYIIPNFSKLT--NSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVC 362
            |||..|:|.|:.|:..:..  .|..:|.|:.    ::|.|.|:::.|.|:|.|..|:...:.|: 
  Fly   250 PGAHLGLKNYMTPSIEEFVVGTSSTFIMALQ----AFGAGWGSVITLSSFNGFKTNIMSYSWII- 309

  Fly   363 TVNSSTSMFAGFVIFSVIGFMAHEQ----QRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLF 423
               |...:|. :::|.::.||....    .:|:.:.......:.||...||:..|....:|:.::
  Fly   310 ---SFGQIFI-YIMFGMVSFMLEHYFLGLPKPLFETQVINHWVLFLSSASALSSLGWPNLWTFIY 370

  Fly   424 FFMLL---LIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAI-----VCALSYLVGLTCITQG 480
            :.|||   ||.:.:|..|:   :.::.||:.||..|::|:.:.:     ||:|.:     |...|
  Fly   371 YTMLLMAALIVITTQIFTI---LQSLFDEFEQLRAKKQEVTLGLIGGLAVCSLYF-----CTNHG 427

  Fly   481 GMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWK-FCWCVTTP- 543
            .:| |.||...|:....||.|:..  :.:.|.||.|||...||.|:| .|...|| |......| 
  Fly   428 VLY-FAILSIDAIFSQTLLHLLLL--LVVLWVYGRDRFQKDIKFMLG-QPFASWKVFILRFVAPP 488

  Fly   544 --AICLGVFFFNIVQWTPVKYLDYSYPWWAHAFGWFTAL----SSMLYIPLYMFWLWKRTPGELS 602
              .|||.:.....::       ::||   :.:...|.|:    ..:|.||.|.|:...:.||.:|
  Fly   489 TLVICLVLEIKMCLE-------EHSY---SSSVLHFMAIILVGLPILAIPAYGFYYIHQRPGSIS 543

  Fly   603 EKIRA 607
            |..||
  Fly   544 ELFRA 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 151/586 (26%)
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 133/517 (26%)

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