DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gat and Ntl

DIOPT Version :10

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster


Alignment Length:603 Identity:230/603 - (38%)
Similarity:364/603 - (60%) Gaps:34/603 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LQSSSPTTTDTSNKQQLVKIEQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFI 97
            :.::.|.||:.:.|.:  :||:..:||.|.||.:||||::|.|||:|||||||||||::||.||:
  Fly     1 MANNQPPTTNATRKDK--RIERDENRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFL 63

  Fly    98 LPYIITLFLAGIPMFFMELALGQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAV 162
            :||::.:.|||||:|:||:.:||..:.|..|:|::.|:.||.|.|..|::.:...||.||:::.:
  Fly    64 IPYLLMVILAGIPLFYMEILIGQFSSTGCTGMFRMTPLLKGTGIAQVVVNAYCVCYYSVIISYPI 128

  Fly   163 FYFFMSMRADVPWRTCNNWWNTVNCV--SQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTD 225
            ...|......|||..|:|.|||.:||  |...::|           :..|...||          
  Fly   129 RMIFYCFFKKVPWEDCSNSWNTDDCVTASDMGKQN-----------SSDVFKTSA---------- 172

  Fly   226 PVKEFWERRALQISHGIEEIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLT 290
              .||:....|:||..|.::|.:.||....|::.||:.|||:.:|:|..|||||||..|||:||.
  Fly   173 --DEFFHLEVLRISTDISDLGGMVWEQLTALIITWIIIYFCLMRGIKSVGKVVYFTVPFPYLLLF 235

  Fly   291 ILLVRGITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVY 355
            |||:||.|||||.:|||||:.|.:.:|.:.:||.||..|:||..|.|.|.:|.:.|::.|.||..
  Fly   236 ILLIRGATLPGAWKGIKFYLYPEWHRLLDLKVWADAAVQMFFGIGPGWGGIVNMASFSSFRNNAK 300

  Fly   356 KDALIVCTVNSSTSMFAGFVIFSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWS 420
            .|::::.::|..||:.||||:|||:||::.:...||..||..|.||||:.||.|:..||...:|:
  Fly   301 CDSVLIVSINVFTSLLAGFVVFSVLGFLSEKSGIPVESVATGGAGLAFVTYPEAIALLPVPQLWA 365

  Fly   421 CLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIVCALSYLVGLTCI--TQGGMY 483
            .:|||||.|:|:||.|..:|..:::|:||| ..:|..|.....|.|.:  .:||:.|  |.|||:
  Fly   366 LMFFFMLFLLGIDSVFVQLEAIMSSILDEW-YWVRSHKCKLTLISCLI--FLGLSSIMCTNGGMF 427

  Fly   484 IFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLG 548
            |.|:.|.|: |...::.:...|.:.::|.||:..|...::.|:|..||::|:..|.|.||.|.:.
  Fly   428 ILQLFDWYS-SAIAVIVICLVEIIMVAWIYGIKNFMLDVEFMLGKRPTLYWRIVWQVVTPVIIIF 491

  Fly   549 VFFFNIVQWTPVKYLDYSYPWWAHAFGWFTALSSMLYIPLYMFWLWKRTPGELSEKIRALVR-ID 612
            :...:||....:.|.:..||.||...||.:..:|:::||||:|::..|....|.:.::..:: :|
  Fly   492 ILITSIVFIRTITYNNIPYPQWAIIIGWASCFTSVMWIPLYIFYIMIRKRATLCDSLKKRLKPLD 556

  Fly   613 EDVTRLREKMLREAYAKE 630
            ......:::...||:.::
  Fly   557 WTPADPQDRAEYEAFRRQ 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 221/557 (40%)
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:444915 221/556 (40%)

Return to query results.
Submit another query.