DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gat and SLC6A19

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001003841.1 Gene:SLC6A19 / 340024 HGNCID:27960 Length:634 Species:Homo sapiens


Alignment Length:646 Identity:220/646 - (34%)
Similarity:316/646 - (48%) Gaps:119/646 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LQSSSPTTTDTSNKQQLVKIEQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFI 97
            |.:..|:..:....:|    |:...|..|.:|..::|:.:|..:||||||||||||..:|||||:
Human    11 LDARIPSLAELETIEQ----EEASSRPKWDNKAQYMLTCLGFCVGLGNVWRFPYLCQSHGGGAFM 71

  Fly    98 LPYIITLFLAGIPMFFMELALGQMLTIGGLGVF-KIAPIFKGIGYAAAVMSCWMNVYYIVILAWA 161
            :|::|.|.|.|||:.::|.|:||.|..|.|||: .|.|..||:|.|:.:.|..:.:||..|::|.
Human    72 IPFLILLVLEGIPLLYLEFAIGQRLRRGSLGVWSSIHPALKGLGLASMLTSFMVGLYYNTIISWI 136

  Fly   162 VFYFFMSMRADVPWRTCNNWWNTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDP 226
            ::|.|.|.:..:||..|....|....|.:..|                              :.|
Human   137 MWYLFNSFQEPLPWSDCPLNENQTGYVDECAR------------------------------SSP 171

  Fly   227 VKEFWERRALQISHGIEEIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTI 291
            |..||.|..|.||..|.:.|:|:|.:...|...|.:.|.|..:|::.|||.||.|:..|||:|||
Human   172 VDYFWYRETLNISTSISDSGSIQWWMLLCLACAWSVLYMCTIRGIETTGKAVYITSTLPYVVLTI 236

  Fly   292 LLVRGITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYK 356
            .|:||:||.||..||.|...||.::|...:.|:||..|:|||:.|..|.|::..|||...||..|
Human   237 FLIRGLTLKGATNGIVFLFTPNVTELAQPDTWLDAGAQVFFSFSLAFGGLISFSSYNSVHNNCEK 301

  Fly   357 DALIVCTVNSSTSMFAGFVIFSVIGFMAHE--------------------------------QQR 389
            |::||..:|..||::...|::|||||.|.:                                |||
Human   302 DSVIVSIINGFTSVYVAIVVYSVIGFRATQRYDDCFSTNILTLINGFDLPEGNVTQENFVDMQQR 366

  Fly   390 -----PVA---------DV------AASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDS 434
                 |.|         |:      |..|.||||:|:..|:.::|.||:||.|||.||..:||.|
Human   367 CNASDPAAYAQLVFQTCDINAFLSEAVEGTGLAFIVFTEAITKMPLSPLWSVLFFIMLFCLGLSS 431

  Fly   435 QFCTMEGFITAIID------EWPQLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAV 493
            .|..|||.:..:.|      :||      ||:...::|..::|:|.......|.|...:|||||.
Human   432 MFGNMEGVVVPLQDLRVIPPKWP------KEVLTGLICLGTFLIGFIFTLNSGQYWLSLLDSYAG 490

  Fly   494 SGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVF-FFNIVQ- 556
            | ..||.:.|.|..|:.:.||||||...|:.|||:.|.::|:..|.|.:|.:.|.:| ||.:|: 
Human   491 S-IPLLIIAFCEMFSVVYVYGVDRFNKDIEFMIGHKPNIFWQVTWRVVSPLLMLIIFLFFFVVEV 554

  Fly   557 --------WTP-----VKYLDYSYPWWAHAFGWFTALSSMLYIPLYMFWLWKRT----PGE 600
                    |.|     .|....|||.|.:......|....|.||.|..:...|.    ||:
Human   555 SQELTYSIWDPGYEEFPKSQKISYPNWVYVVVVIVAGVPSLTIPGYAIYKLIRNHCQKPGD 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 216/621 (35%)
SLC6A19NP_001003841.1 SLC5-6-like_sbd 32..612 CDD:294310 214/616 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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