DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and slc6a19b

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_956030.1 Gene:slc6a19b / 326030 ZFINID:ZDB-GENE-030131-4755 Length:651 Species:Danio rerio


Alignment Length:667 Identity:214/667 - (32%)
Similarity:326/667 - (48%) Gaps:130/667 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 VKIEQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFM 114
            :::|:..||..|.:|..::|:.||..:||||||||||||..:|||||::|::|.|...|||:..:
Zfish    25 LEVEEAGDRPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVFEGIPLLHL 89

  Fly   115 ELALGQMLTIGGLGVFK-IAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTC 178
            |.|:||.|..|.:||:: |.|...|:|.|:..:|..:::||..|:||.::|||.|.:..:||..|
Zfish    90 EFAIGQRLRKGSVGVWRTINPYMLGVGIASMCVSFLVSLYYNTIIAWVMWYFFNSFQDPLPWSQC 154

  Fly   179 NNWWNTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQISHGIE 243
            ....|....:.:                    |..|:          ||..||.|..|..|..|:
Zfish   155 PINENRTGPIPE--------------------CGKSS----------PVDYFWYRETLNTSAAID 189

  Fly   244 EIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKF 308
            :.|.::..:...|:..|.:.|.|..:|::.|||.||.|:..||::|||.|:||:||.|:::||||
Zfish   190 DTGGLQVWMVLCLISAWAVLYVCCIRGIETTGKAVYVTSTLPYLVLTIFLIRGLTLKGSVDGIKF 254

  Fly   309 YIIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAG 373
            ...|:.::|.|...|:||..|:|:|:.|..|.|::..|||...||..:||:|:..:|:.||::|.
Zfish   255 LFTPDINELANPSTWLDAGAQVFYSFSLAFGGLISFSSYNSVHNNCEQDAVIISVINAFTSIYAA 319

  Fly   374 FVIFSVIGFMAHEQ------------------------QRPVADVAAS----------------- 397
            .||:|:|||.|.|:                        |....||..|                 
Zfish   320 TVIYSIIGFRATERFDDCMNGNILTLLNTFDLPEGFINQSNYQDVFQSLNSTSPDIISSLSLKTC 384

  Fly   398 -----------GPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIID--- 448
                       |.||||:|:..|:.::|.||:||.|||.||..:||.|.|..:||.:..:.|   
Zfish   385 DLNNFLSEGVEGTGLAFIVFTEAITKMPLSPLWSVLFFIMLFCLGLSSMFGNIEGVLVPLQDLGV 449

  Fly   449 ---EWPQLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSIS 510
               .||      |||...:.|.:..||||..:...|.|...:.||:|.| ..||.:.|.|.:.:.
Zfish   450 FPKSWP------KEIISGVTCLVCCLVGLIFVQGSGNYWLALFDSFAGS-IPLLIIAFSEMIGVV 507

  Fly   511 WCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDYS--------- 566
            :.||:|||.:.:..|||:.|.::|:..|...:|.|.|.:|.| ....|..|.:.||         
Zfish   508 YVYGIDRFNEDLIFMIGHKPNIFWQATWRFISPLIMLAIFVF-YFSTTVTKEIFYSAWDPESENF 571

  Fly   567 -------YPWWAHAFGWFTALSSMLYIP-LYMF-----WLWKRTPGELSEKIRALVRI------- 611
                   ||.|.:...:..|....|.:| ..:|     :..|:.|   |..|:.|..:       
Zfish   572 PTLEKKPYPTWIYVIIFLLAGVPSLAVPGTAVFRAIRDYCCKKHP---SASIQQLDSVSYKVQMH 633

  Fly   612 DEDV-TRLREKMLREAY 627
            ||:| |:..||..::.|
Zfish   634 DEEVKTQKTEKFDQKLY 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 205/633 (32%)
slc6a19bNP_956030.1 SLC6sbd_B0AT1 33..613 CDD:212085 200/617 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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