DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gat and CG10804

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster


Alignment Length:673 Identity:237/673 - (35%)
Similarity:346/673 - (51%) Gaps:120/673 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 MSKELGHTTSLQSSSP-----------------TTTDTSNKQQLVKIE-QLPDRGSWSSKMDFIL 69
            ||.....::.|:...|                 ..|.::::|.:|:.| :..:|.||.||:.|:|
  Fly    65 MSDAFDESSELEQDPPPFGSEASTSKAKAELVAIATASADQQDIVEGEKEGEERESWDSKIMFLL 129

  Fly    70 SVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVF-KIA 133
            :.:|.|:|||||||||||..|||||||::||.|.|.:.|||:|::|||:||.|..|.:||: :::
  Fly   130 ATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAIGQRLRKGAIGVWSQVS 194

  Fly   134 PIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQYERKNLHC 198
            |...|||.::||:|..:.:||..|:||.:.|...|..:.:||..|..                  
  Fly   195 PYLGGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESPLPWADCPT------------------ 241

  Fly   199 WDKIINGTT---QKVCSVSALNITSLELTDPVKEFWERRALQISHGIEEIGNIRWELAGTLLLVW 260
              ::....|   :..|..|:          |.:.:|.|..||.|..::...|..:.:|..|::.|
  Fly   242 --RLYKNFTYDHEPECVASS----------PTQFYWYRTTLQCSESVDMPENFNYHMAIALIVSW 294

  Fly   261 ILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEVWID 325
            .|.|.|:.:|:..:||:||.||:||||:|.|...|||||.||.:|:.....|.:..|.:..||::
  Fly   295 FLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGITLKGAADGVAHLFTPRWETLLDPVVWLE 359

  Fly   326 AVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMA------ 384
            |.||||||.||..|.|:|..|||...||.|:||::|...|..||||||.|:||||||.|      
  Fly   360 AGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAILVSLTNCGTSMFAGVVVFSVIGFKATATFDR 424

  Fly   385 -HEQQR-----------PVADV------AASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIG 431
             .|::.           ||.|:      :|||.||||:::..|:.|.||:.:|:.|||.||..:|
  Fly   425 CTEERNGLVAQNKTHNLPVCDLQTELANSASGTGLAFIIFTEAINQFPGAQLWAVLFFLMLFTLG 489

  Fly   432 LDSQFCTMEGFITAIIDE--WPQLLRKRKEIFIAIVCALSYLVGLTCITQG-GMYIFQILDSYAV 493
            :||||.|:||.:|:::|.  :|.|   .||..:..:|.....:.: |...| |.||||::||:| 
  Fly   490 IDSQFGTLEGVVTSLVDMKLFPNL---PKEYIVGALCFSCCTISM-CFANGAGSYIFQLMDSFA- 549

  Fly   494 SGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQ-- 556
            ..|.||.:..|||:|||:.|||.||.|.|:.|.|..|..:|.|||...:|...:.:...:..|  
  Fly   550 GNFPLLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNFYWMFCWKYLSPCAMVTILLASFYQLL 614

  Fly   557 --------WTPVKYLDYSYPW--WAHAFGWFTALSSMLYIPLYMFWLWKRTPGELSEKIRALVRI 611
                    |...|.......|  |.....:|..|||:|:||                 |.|::|:
  Fly   615 TEGSSYPAWIGSKGATEGMEWPHWCIVVAFFLILSSILWIP-----------------IVAVLRL 662

  Fly   612 -------DEDVTRLREKMLREAY 627
                   |.|.....|..|||.:
  Fly   663 CGIKVVEDSDPAWFPEAELREVH 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 222/595 (37%)
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 221/592 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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