DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and Slc6a14

DIOPT Version :10

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_038955501.1 Gene:Slc6a14 / 298340 RGDID:1561810 Length:646 Species:Rattus norvegicus


Alignment Length:621 Identity:257/621 - (41%)
Similarity:373/621 - (60%) Gaps:41/621 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 TDTSNKQQLVKIEQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLF 105
            |.:|....:.:.::..:||:||.|.|::||:||.|:|||||||||||.|.||||||::||.|.|.
  Rat    25 TASSENFHVGENDENQERGNWSKKSDYLLSMVGYAVGLGNVWRFPYLTYTNGGGAFLIPYAIMLA 89

  Fly   106 LAGIPMFFMELALGQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMR 170
            |||:|:||:|.:|||..::|.:.|::|.|:|:|:|....::|.::.:||.||:|::::|.|.|.:
  Rat    90 LAGLPLFFLECSLGQFASLGPVSVWRILPLFQGVGITMVLISIFVTIYYNVIIAYSLYYLFASFQ 154

  Fly   171 ADVPWRTCNNWWNTVNCVSQYERKNLHCWDKIINGTT----------QKVCSVSALNITSLELTD 225
            :.:||..|::.|...||..|          .|:.|..          ..:..|::.|.|.|..::
  Rat   155 SVLPWANCSSSWADDNCSRQ----------PIVTGCRVSTDTGGDMFMNISWVNSNNFTCLNGSE 209

  Fly   226 -------PVKEFWERRALQISHGIEEIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTAL 283
                   |.:::|::..|:.|.|::|.|.|.|.||..|||.||:....::||:|.:|||||||||
  Rat   210 VFRPGQLPSEQYWDKVTLRRSSGMDETGVIVWYLALCLLLAWIIVGAALFKGIKSSGKVVYFTAL 274

  Fly   284 FPYVLLTILLVRGITLPGALEGIKFYI--IPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGS 346
            ||||:|.|||:||.||.||.:||.:||  ..||:||..:|||.||.||||:|..:..|.||||.|
  Rat   275 FPYVVLLILLIRGATLEGASKGISYYIGAQSNFTKLREAEVWKDAATQIFYSLSVAWGGLVALSS 339

  Fly   347 YNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVL 411
            ||||.||.|.||:|||..|..||:||||.|||::|.|||...:.|:.|..||..|||:.||.|:.
  Rat   340 YNKFNNNCYSDAIIVCLTNCLTSVFAGFAIFSILGHMAHISGKEVSQVVKSGFDLAFIAYPEALA 404

  Fly   412 QLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIVCAL-SYLVGLT 475
            ||||.|.||.|||||||.:||||||.::|...|.|.|.:|:.: ||..:.|.:.|.| .:|:||.
  Rat   405 QLPGGPFWSILFFFMLLTLGLDSQFASIETITTTIQDLFPKAM-KRMRVPITLGCCLILFLLGLV 468

  Fly   476 CITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIG---YYPTVWWKFC 537
            |:||.|:|...::|.:. :|:.:|.....|...|.|.||.:||.:.|:.|||   :...:||:.|
  Rat   469 CVTQAGIYWVHLIDHFC-AGWGILIAAILEIAGIIWIYGGNRFIEDIEMMIGAKRWLFWLWWRAC 532

  Fly   538 WCVTTPAICLGVFFFNIVQWTPVKYLDYSYPWWAHAFGWFTALSSMLYIPLYMFWLWKRTPGELS 602
            |.|.||.:...:..:::|::....|.|..||.|..|.||...:..:::||:.......|..|.:.
  Rat   533 WFVITPILLSAILVWSLVKFHRPNYADIPYPDWGVALGWCMIIFCIIWIPIMAIIKIVRAEGNIL 597

  Fly   603 EKIRALVRIDEDVTRLREKMLREAY------AKEIE 632
            ::|....|...:.....||...|.|      |||.:
  Rat   598 QRIIKCCRPASNWGPYLEKHRGERYKDMAEPAKETD 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 247/575 (43%)
Slc6a14XP_038955501.1 SLC6sbd_ATB0 42..645 CDD:271391 255/604 (42%)

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