DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and Slc6a3

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_036826.1 Gene:Slc6a3 / 24898 RGDID:3715 Length:619 Species:Rattus norvegicus


Alignment Length:572 Identity:254/572 - (44%)
Similarity:366/572 - (63%) Gaps:25/572 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LVKIEQLP----DRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGI 109
            |:...|.|    :|.:||.|:||:|||:|.|:.|.|||||||||||||||||::||::.:.:||:
  Rat    47 LINPPQTPVEAQERETWSKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMVIAGM 111

  Fly   110 PMFFMELALGQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVP 174
            |:|:|||||||....|..||:||.|:.||:|:...::|.::..:|.||:|||:.|||.|...|:|
  Rat   112 PLFYMELALGQFNREGAAGVWKICPVLKGVGFTVILISFYVGFFYNVIIAWALHYFFSSFTMDLP 176

  Fly   175 WRTCNNWWNTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQI- 238
            |..|||.||:.|| |.....|                |...|.:.....|.|..|::||..|.: 
  Rat   177 WIHCNNTWNSPNC-SDAHASN----------------SSDGLGLNDTFGTTPAAEYFERGVLHLH 224

  Fly   239 -SHGIEEIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGA 302
             |.||:::|..||:|...|:||.:|.||.:|||||.:||||:.||..|||:||.||:||:|||||
  Rat   225 QSRGIDDLGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGA 289

  Fly   303 LEGIKFYIIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSS 367
            ::||:.|:..:|.:|..:.|||||.||:.||.|:|.|.|:|..||||||||.|:||:|..::||.
  Rat   290 MDGIRAYLSVDFYRLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIITTSINSL 354

  Fly   368 TSMFAGFVIFSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGL 432
            ||..:|||:||.:|:||.:...|:.|||..||||.|::||.|:..||.|..|:.:||.|||.:|:
  Rat   355 TSFSSGFVVFSFLGYMAQKHNVPIRDVATDGPGLIFIIYPEAIATLPLSSAWAAVFFLMLLTLGI 419

  Fly   433 DSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFC 497
            ||....||..||.::||: |||.:.:|:|...:...::|:.|.|:|.||:|:|.:||.:| :|..
  Rat   420 DSAMGGMESVITGLVDEF-QLLHRHRELFTLGIVLATFLLSLFCVTNGGIYVFTLLDHFA-AGTS 482

  Fly   498 LLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKY 562
            :|:.:..|.:.::|.|||.:|.|.||.|.|..|.::|:.||.:.:|...|.|...:||.:.|..|
  Rat   483 ILFGVLIEAIGVAWFYGVQQFSDDIKQMTGQRPNLYWRLCWKLVSPCFLLYVVVVSIVTFRPPHY 547

  Fly   563 LDYSYPWWAHAFGWFTALSSMLYIPLYMFWLWKRTPGELSEKIRALVRIDED 614
            ..|.:|.||:|.||..|.|||..:|:|..:.:...||...||:...:..::|
  Rat   548 GAYIFPDWANALGWIIATSSMAMVPIYATYKFCSLPGSFREKLAYAITPEKD 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 250/554 (45%)
Slc6a3NP_036826.1 SLC6sbd_DAT1 60..613 CDD:212083 251/559 (45%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589 10/28 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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