DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and Slc6a20b

DIOPT Version :10

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_035861.2 Gene:Slc6a20b / 22599 MGIID:1336891 Length:635 Species:Mus musculus


Alignment Length:619 Identity:201/619 - (32%)
Similarity:302/619 - (48%) Gaps:104/619 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PTTTDTSNKQQLVKIEQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYII 102
            |.:|:.::...:.|:     |..|.:.:.|:|..:..|:||||||||||||...|||:|::||||
Mouse    33 PRSTECAHPGVVEKV-----RPKWDNPLQFLLVCISYAVGLGNVWRFPYLCQMYGGGSFLVPYII 92

  Fly   103 TLFLAGIPMFFMELALGQMLTIGGLGVFK-IAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFF 166
            .|.:.|:|:.::|||:||.:..|.:|.:: |:|...|:|.|:.|:|...:||:.||..||::|.|
Mouse    93 MLIVEGMPLLYLELAVGQRMRQGSIGAWRTISPYLSGVGIASLVVSFLASVYFNVINTWALWYLF 157

  Fly   167 MSMRADVPWRTCNNWWNTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFW 231
            .|.:..:||..|     .:|  |.:...:..|                       |.....:.||
Mouse   158 HSFQDPLPWSVC-----PLN--SNHTGYDEEC-----------------------EKASSTQYFW 192

  Fly   232 ERRALQISHGIEEIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRG 296
            .|:.|.||..|:|.|.::||.|..|.|.|::.|.||.:|.:.||||||||...||.:|.|.||||
Mouse   193 YRKTLNISPSIQENGGVQWEPALCLTLAWLMVYLCILRGTESTGKVVYFTTSLPYFVLIIYLVRG 257

  Fly   297 ITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIV 361
            :||.||..|:.:...|...:|.|.:.||:|.||||||.|||.|.|:|..|||:.:|:..|.||||
Mouse   258 LTLHGATNGLAYMFTPKIEQLANPKAWINAATQIFFSLGLGCGGLIAFASYNEPSNDCQKHALIV 322

  Fly   362 CTVNSSTSMFAGFVIFSVIGFMA-------------------------------HEQQRPVA--- 392
            ..:||:|::|:..|.||:.||.|                               .|.:..:|   
Mouse   323 SVINSTTAIFSSIVTFSIYGFKATFNYENCLNKVILLLTNSFDLEDGFLTVSNLEEVKNYLASTY 387

  Fly   393 --------------------DVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFC 437
                                |.|..|.||||:||..|:..:..|.:||.|:|||||.:|:.|...
Mouse   388 PNKYSEVFPHIRNCSLESELDTAVQGTGLAFIVYTEAIKNMEVSQLWSVLYFFMLLTLGMGSMVG 452

  Fly   438 TMEGFITAIIDEWPQLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLI 502
            |....:|.:.|.........||....:||.|:..:|:....:.|.|.|.:.:.|..: ..||.::
Mouse   453 TGTAILTPLTDSKIISSYLPKEAISGLVCLLNCAIGMVFTMEAGNYWFDLFNDYTAT-LSLLLIV 516

  Fly   503 FFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDY-- 565
            ..|.:::.:.||:.||...::.|.|...:.:||..|...:|.:.:|:|.|.:..:.....|.|  
Mouse   517 LVETIAVCYVYGLKRFESDLRAMTGRTLSWYWKVMWAFVSPLLIVGLFIFYLSDYILTGTLQYQA 581

  Fly   566 -----------SYPWWAHAFGWFTALSSMLYIPL 588
                       .||.:|.|.......||.:.|||
Mouse   582 WDATQGHVVTKDYPTYALAVIGLLVASSTMCIPL 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 198/599 (33%)
Slc6a20bNP_035861.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 2/4 (50%)
SLC5-6-like_sbd 45..620 CDD:444915 199/607 (33%)

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