DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and Slc6a6

DIOPT Version :10

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_033346.2 Gene:Slc6a6 / 21366 MGIID:98488 Length:621 Species:Mus musculus


Alignment Length:558 Identity:310/558 - (55%)
Similarity:399/558 - (71%) Gaps:20/558 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQ 120
            |.|..||||:||:|||.|..:||||||||||||||||||||::||.|.||.:|:|:||:|:.:||
Mouse    39 PQREKWSSKIDFVLSVAGGFVGLGNVWRFPYLCYKNGGGAFLIPYFIFLFGSGLPVFFLEVIIGQ 103

  Fly   121 MLTIGGLGVF-KIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNT 184
            ..:.||:..: ||.|:|.|||||:.|:...:|||||||||||.:|.|.|.:.|:||..||:.|||
Mouse   104 YTSEGGITCWEKICPLFSGIGYASIVIVSLLNVYYIVILAWATYYLFHSFQKDLPWAHCNHSWNT 168

  Fly   185 VNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQISHGIEEIGNIR 249
            ..|:....|:|...|           .|:|..|.||     ||.|||||..|.:|.||:..|:::
Mouse   169 PQCMEDTLRRNESHW-----------VSLSTANFTS-----PVIEFWERNVLSLSSGIDNPGSLK 217

  Fly   250 WELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNF 314
            |:||..|||||::|:|||||||:.|||||||||.||:.:|.:|||||:|||||.||||||:.|:.
Mouse   218 WDLALCLLLVWLVCFFCIWKGVRSTGKVVYFTATFPFAMLLVLLVRGLTLPGAGEGIKFYLYPDI 282

  Fly   315 SKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSV 379
            |:|.:.:|||||.|||||||.:.||.:.:||||||:..|.|:|.:::..:||.||..:||.|||:
Mouse   283 SRLGDPQVWIDAGTQIFFSYAICLGAMTSLGSYNKYKYNSYRDCMLLGCLNSGTSFVSGFAIFSI 347

  Fly   380 IGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFIT 444
            :||||.||...:||||.|||||||:.||.||..:|....||.|||.||||:||||||..:||.||
Mouse   348 LGFMAQEQGVDIADVAESGPGLAFIAYPKAVTMMPLPTFWSILFFIMLLLLGLDSQFVEVEGQIT 412

  Fly   445 AIIDEWPQLLRK--RKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECV 507
            :::|.:|..|||  |:||||||:|::|||:|||.:|:||||:||:.|.||.||.||||:.||||.
Mouse   413 SLVDLYPSFLRKGYRREIFIAILCSISYLLGLTMVTEGGMYVFQLFDYYAASGVCLLWVAFFECF 477

  Fly   508 SISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLD-YSYPWWA 571
            .|:|.||.|..||||:|||||.|..|.|:.|.|.|||:|:|.|.|::|::.|:.|.. |.||.||
Mouse   478 VIAWIYGGDNLYDGIEDMIGYRPGPWMKYSWAVITPALCVGCFVFSLVKYVPLTYNKVYRYPDWA 542

  Fly   572 HAFGWFTALSSMLYIPLYMFWLWKRTPGELSEKIRALV 609
            ...||..||||||.|||.:..|..||.|.|..:|:.|:
Mouse   543 IGLGWGLALSSMLCIPLVIVILLCRTEGPLRVRIKYLI 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 309/556 (56%)
Slc6a6NP_033346.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 1/2 (50%)
SLC5-6-like_sbd 41..582 CDD:444915 309/556 (56%)

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