DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and Slc6a2

DIOPT Version :10

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_033235.3 Gene:Slc6a2 / 20538 MGIID:1270850 Length:617 Species:Mus musculus


Alignment Length:609 Identity:257/609 - (42%)
Similarity:371/609 - (60%) Gaps:49/609 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GGGD--------VCKHESIEMSKELGHTTSLQSSSPTTTDTSNKQQLVKIEQLPDRGSWSSKMDF 67
            ||.|        .||...:.:.||......|.:|..:...              .|.:|..|:||
Mouse    15 GGADPLPEQPLRPCKTADLLVVKERNGVQCLLASQDSDAQ--------------PRETWGKKIDF 65

  Fly    68 ILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVFKI 132
            :|||||.|:.|.|||||||||||||||||::||.:.|.:||:|:|:|||||||....|...|:||
Mouse    66 LLSVVGFAVDLANVWRFPYLCYKNGGGAFLIPYTLFLIIAGMPLFYMELALGQYNREGAATVWKI 130

  Fly   133 APIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQYERKNLH 197
            .|.|||:|||..:::.::..||.||:||:::|.|.|...::||..|.:.||:.||          
Mouse   131 CPFFKGVGYAVILIALYVGFYYNVIIAWSLYYLFASFTLNLPWTNCGHSWNSPNC---------- 185

  Fly   198 CWDKIINGTTQKVCSVSAL----NITSLELTDPVKEFWERRALQI--SHGIEEIGNIRWELAGTL 256
                    |..|:.:.|.|    ..:..:.| |..||:||..|.:  |.||.:||..:|:|...|
Mouse   186 --------TDPKLLNASVLGDHTKYSKYKFT-PAAEFYERGVLHLHESSGIHDIGLPQWQLLLCL 241

  Fly   257 LLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSE 321
            ::|.::.||.:|||||.:||||:.||..||.:|.:|||.|:|||||..||..|:..:|.:|..:.
Mouse   242 MVVIVVLYFSLWKGVKTSGKVVWITATLPYFVLFVLLVHGVTLPGASNGINAYLHIDFYRLKEAT 306

  Fly   322 VWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMAHE 386
            |||||.||||||.|.|.|.|:|..|||||.||.|:|||:..|:|..||..:||.|||::|:||||
Mouse   307 VWIDAATQIFFSLGAGFGVLIAFASYNKFDNNCYRDALLTSTINCVTSFISGFAIFSILGYMAHE 371

  Fly   387 QQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWP 451
            .:..:.|||..|.||.|::||.|:..|.||..|:.|||.|||.:||||....||..||.:.|:: 
Mouse   372 HKVNIEDVATEGAGLVFILYPEAISTLSGSTFWAVLFFLMLLALGLDSSMGGMEAVITGLADDF- 435

  Fly   452 QLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVD 516
            |:|::.:::|..:|...::|:.|.|||:||:|:..:||::| :|..:|:.:..|.:.:||.||||
Mouse   436 QVLKRHRKLFTCVVTISTFLLALFCITKGGIYVLTLLDTFA-AGTSILFAVLMEAIGVSWFYGVD 499

  Fly   517 RFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDYSYPWWAHAFGWFTALS 581
            ||.:.|:.|:|:.|.::|:.||...:||..|.|...:|:.:.|:.|.||:||.||:..||..|||
Mouse   500 RFSNDIQQMMGFKPGLYWRLCWKFVSPAFLLFVVVVSIINFKPLTYDDYTYPPWANWVGWGIALS 564

  Fly   582 SMLYIPLYMFWLWKRTPGELSEKI 605
            ||:.:|.|:.:.:....|.|.|::
Mouse   565 SMILVPAYVIYKFLSIRGSLWERV 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 248/554 (45%)
Slc6a2NP_033235.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 3/5 (60%)
SLC5-6-like_sbd 56..615 CDD:444915 248/554 (45%)

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