DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and snf-12

DIOPT Version :10

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_509527.1 Gene:snf-12 / 181143 WormBaseID:WBGene00004911 Length:1022 Species:Caenorhabditis elegans


Alignment Length:55 Identity:14/55 - (25%)
Similarity:23/55 - (41%) Gaps:14/55 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 CSNYEENVKCIEEDLAKTRFCSQPDIE----NFKTFSHLI--VETCKATVEYQKA 169
            |.....:||.|.|        |||.:.    |..|.:.::  |...|:..::||:
 Worm   159 CGGCSASVKKILE--------SQPQVASASVNLTTETAIVWPVPEAKSVPDWQKS 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 14/55 (25%)
snf-12NP_509527.1 SLC6sbd 158..660 CDD:271359 14/55 (25%)

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