Protein Alignment Gat and snf-3

DIOPT Version :10

• Sequence 1: NP_651930.2
• Gene: Gat / 43805
• FlyBaseID: FBgn0039915
• Length: 636
• Species: Drosophila melanogaster
• Sequence 2: NP_493910.2
• Gene: snf-3 / 173493
• WormBaseID: WBGene00004902
• Length: 600
• Species: Caenorhabditis elegans
• Alignment Length: 611
• Identity: 249/611 - (40%)
• Similarity: 369/611 - (60%)
• Gaps: 39/611 - (6%)

  Fly    38 PTTTDTSNKQQLVKIE--QLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPY 100
            |..||.:..::|.:.:  :.||||.|:.|.||::|:|..|:||||||||||||||||||:|::.|
 Worm     8 PLPTDEAKAKELEQSQHSEEPDRGQWTGKFDFLMSMVAYAVGLGNVWRFPYLCYKNGGGSFLVVY 72

  Fly   101 IITLFLAGIPMFFMELALGQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYF 165
            :|...||.:|:|.||:.:||.|..|.:.::.:.|:|:|:|....|::.....|:.||:|||:||.
 Worm    73 MIFFCLAAVPIFLMEVTVGQYLQKGAMEMWLMCPLFRGVGIGNVVIAFMCIAYFCVIVAWAMFYM 137

  Fly   166 FMSMRADVPWRTCNNWWNTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEF 230
            ..|:....||.||||:||...||:..|........|.:      |.|......||:|      :|
 Worm   138 ISSIAWVFPWETCNNYWNDATCVTGKENFTELARIKAL------VASAGGHTQTSVE------QF 190

  Fly   231 WERRALQISHGIEEIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVR 295
            ||:|.|..:..|.|.|.|:|||...:...|::.||.:|||:....|.|||.|||||||:.|||:|
 Worm   191 WEKRVLHDTGDISEFGGIQWELFFIMAAAWLIVYFALWKGITQARKFVYFCALFPYVLIFILLIR 255

  Fly   296 GITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALI 360
            |:||.||..||.||:.||.::|.::.||.||.||:|:|||:|.|.|:||||:|||.:|.:|||:.
 Worm   256 GLTLEGAGTGIYFYLKPNATRLLDTAVWKDAGTQVFYSYGVGFGALIALGSHNKFNHNCFKDAIT 320

  Fly   361 VCTVNSSTSMFAGFVIFSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFF 425
            :|.:|..||:.|||.:||::|:|:|..|:.::::...|.|||||.||.....||...:::.|||.
 Worm   321 MCFINGCTSITAGFAVFSILGYMSHVAQKDISEIVKPGVGLAFLAYPEVASNLPMKQVFAVLFFL 385

  Fly   426 MLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDS 490
            |:.::|||||.|.|||..||:.|.:| :|||.|:..:.|.|...:.:|:..:|..|.:...:.|:
 Worm   386 MITILGLDSQVCMMEGLFTALEDAFP-ILRKYKKQSLGIFCLFFFCIGIPMVTHSGSHWLTLFDA 449

  Fly   491 YAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIG--------YYPTVWWKFCWCVTTPAICL 547
            |..||:.||:::|||.|.:::.:|.......:.:|||        |.    ||||    .||..|
 Worm   450 YGASGYALLFVVFFEVVGLAYGFGAHNIRKALHEMIGVTLPKGIEYV----WKFC----APATSL 506

  Fly   548 GVFFFNIVQWTPVKYLD-YSYPWWAHAFGWFTALSSMLYIP----LYMFWLWKRTPGELSEKIRA 607
            .:|.|.:|.:.||||.| ..:|:||:|||||.:..||:.||    .|:|:..|..  .|.|::|.
 Worm   507 VLFVFCVVYYHPVKYPDGKDFPFWANAFGWFLSSCSMVVIPGYAIYYLFFTNKHL--TLKERVRK 569

  Fly   608 LVRIDEDVTRLREKMLREAYAKEIEF 633
            .:.:|.......:|.|.. .|:|::|
 Worm   570 GLNLDGSFESPAKKNLVN-NAEELKF 594

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gat	NP_651930.2	SLC6sbd-TauT-like	58..611	CDD:271387	237/565 (42%)
snf-3	NP_493910.2	SLC6sbd-TauT-like	30..571	CDD:271387	237/563 (42%)