DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gat and C09E8.1

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_493757.2 Gene:C09E8.1 / 173447 WormBaseID:WBGene00015644 Length:783 Species:Caenorhabditis elegans


Alignment Length:641 Identity:125/641 - (19%)
Similarity:202/641 - (31%) Gaps:242/641 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 TLFLAGIPM----------------FFMELALGQMLTIGGL------GVF-KIAPIFKGIGYAAA 144
            |:.||..|:                ||...||..|:.:|.|      ..| |:|||..|||    
 Worm    12 TIILAAAPLASQLAISDIRWIFYFPFFAIPALTLMMIVGHLSKSAAVSTFRKLAPISAGIG---- 72

  Fly   145 VMSCWMNVYYIVILAWA--------VFYFFMSMRADVPWR-TCNNWWNTVNCVSQYERKNLHCWD 200
                |...:::....:|        |.|...|:|..:.|. :|::.:||..|         |.:|
 Worm    73 ----WALTWHVAEKLYAESLRASQYVLYILFSIRPYLSWAVSCDHTYNTEYC---------HDFD 124

  Fly   201 KIINGTTQKVCSVSALNITSLE----LTD---PVKEF-----------------WERRALQISHG 241
            .              .|||..|    ..|   |.:||                 ||.....:...
 Worm   125 D--------------SNITVTEGKHHYPDNFWPAQEFNRYVIRNNAPITKMPAEWEPNMWYLGPS 175

  Fly   242 IEEIGNIRW-----ELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPG 301
            .|   ...|     .|....:|.|::.:|.|.|.....|.::....|...::|.|.::.|:|   
 Worm   176 DE---TFTWAFPSIPLQTAHILTWLIIWFSISKYYDRLGDILLKGFLLVPIILYIAVIIGLT--- 234

  Fly   302 ALEGIKF-YIIPNF-SKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTV 364
               |..| :...|. ::|.||     |:::..|.:...|     .||        |:.::::  |
 Worm   235 ---GFGFHFTTANIQAELENS-----AISKDPFDFWADL-----RGS--------YRTSILI--V 276

  Fly   365 NSSTSMFAGFVIFSV------------------------------IGFMAH--EQQRPVADVAAS 397
            :.||: |.|||:.:.                              :|...|  :||......|::
 Worm   277 DYSTA-FTGFVLLATSRLRNGVSGLNALLLVPFMMIVPTMQTLIRLGCEGHVADQQPNYKIYAST 340

  Fly   398 GPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFI-TAIIDEWPQLLRKRKEIF 461
            ...::|.:.|.........|:||.|::....|.|..........|| .:.||::|.:....|:..
 Worm   341 DETISFDLLPVCFATSHLGPVWSGLYYTAQYLYGSLGPMIVYVSFIYQSFIDDFPIVQNSPKQCI 405

  Fly   462 IAIVCAL------------------------SYLVGLTC------------ITQGGMYIFQI--- 487
            ..||.|.                        :.||.||.            :.|..|...||   
 Worm   406 GMIVLAFLMPSVFLYMPLGTKIAAFFRYTSQTALVQLTVFILIFFVYGWQKLEQDVMMTSQIPAR 470

  Fly   488 ---LDSYAVSGFCLLWLIFFECVSISWCYGVDRFYD-----------------------GIKDMI 526
               |:.:..:...:..::.|..|....|..:...:|                       .|:.::
 Worm   471 PSVLEYFTRATSPIFTVLLFTVVPALICTKLVAVFDFLWAGNDVNKHISAGVQFLPFPTVIRQIV 535

  Fly   527 GYYPTVWWKFCWCVTTPAICLGV---------FFFNIVQWTPVKYLDYSYPWWAHA 573
            ||.         .:..|.|.:||         .|.:.:.|...  |..|..|.|||
 Worm   536 GYL---------VIFAPIIIMGVGAALTVYQMVFKHGLSWKDT--LKPSPEWMAHA 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 125/641 (20%)
C09E8.1NP_493757.2 SLC5-6-like_sbd 29..>463 CDD:294310 98/494 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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