DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and Slc6a5

DIOPT Version :10

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_063131123.1 Gene:Slc6a5 / 171148 RGDID:621824 Length:812 Species:Rattus norvegicus


Alignment Length:594 Identity:267/594 - (44%)
Similarity:377/594 - (63%) Gaps:24/594 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GHTTSLQSSSPTTTDTSNKQQLVKIEQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNG 92
            |..:.|..|..|||...::|.    ::...||:||||:|||||:||.|:|||||||||||.::||
  Rat   180 GIASVLPGSVATTTIPEDEQG----DENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFQNG 240

  Fly    93 GGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVI 157
            ||||::||::.|.|||:|:||:|::|||..:.|.:.|:|..|..:|.|.|..::|..:.:||.||
  Rat   241 GGAFLIPYLMMLALAGLPIFFLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNVI 305

  Fly   158 LAWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQYERKNLHCWDKIINGTTQKV-------CSVSA 215
            :.:.:||.|.|..:.:||.:|||.|||..|    :.|.....|..:.|...|:       |..:.
  Rat   306 ICYTLFYLFASFVSVLPWGSCNNPWNTPEC----KDKTKLLLDSCVIGDHPKIQIKNSTFCMTAY 366

  Fly   216 LNITSLELTDPV--------KEFWERRALQISHGIEEIGNIRWELAGTLLLVWILCYFCIWKGVK 272
            .|:|.:..|...        :|:::...|:||.|||..|.|||.||..|.|.|::.|..:.||:|
  Rat   367 PNLTMVNFTSQANKTFVSGSEEYFKYFVLKISAGIEYPGEIRWPLAFCLFLAWVIVYASLAKGIK 431

  Fly   273 WTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFFSYGLG 337
            .:||||||||.||||:|.|||:||:|||||..||.::|.|.:.|||::.||.||.||||||....
  Rat   432 TSGKVVYFTATFPYVVLVILLIRGVTLPGAGAGIWYFITPKWEKLTDATVWKDAATQIFFSLSAA 496

  Fly   338 LGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMAHEQQRPVADVAASGPGLA 402
            .|.|:.|.|||||.||.|:|.|||...||:||:||||||||||||||:|::..:.:||..|||:|
  Rat   497 WGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMANERKVNIENVADQGPGIA 561

  Fly   403 FLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIVCA 467
            |:|||.|:.:||.||.|:.:||.|||.:|||:.|.|:|..:|:|.||:|:.||..|.:|....|.
  Rat   562 FVVYPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSISDEFPKYLRTHKPVFTLGCCI 626

  Fly   468 LSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTV 532
            ..:::|...|||||:|:||::|:||.| :.|:.:..||.|.||:.||:.||.:.|:.|||:.|.:
  Rat   627 CFFIMGFPMITQGGIYMFQLVDTYAAS-YALVIIAIFELVGISYVYGLQRFCEDIEMMIGFQPNI 690

  Fly   533 WWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDYSYPWWAHAFGWFTALSSMLYIPLYMFWLWKRT 597
            :||.||...||.|...:..|:..||.|:.|..|.||.|:...||.....|:::||:.........
  Rat   691 FWKVCWAFVTPTILTFILCFSFYQWEPMTYGSYRYPNWSMVLGWLMLACSVIWIPIMFVIKMYLA 755

  Fly   598 PGELSEKIR 606
            ||...|:::
  Rat   756 PGRFIERLK 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 260/564 (46%)
Slc6a5XP_063131123.1 None

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