DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and Slc6a12

DIOPT Version :10

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_598422.2 Gene:Slc6a12 / 14411 MGIID:95628 Length:628 Species:Mus musculus


Alignment Length:565 Identity:298/565 - (52%)
Similarity:397/565 - (70%) Gaps:24/565 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 EQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELA 117
            :|:.|||.|::||:|:|||.|..|||||||||||||||||||||.:||.|..|..|||:||:|:|
Mouse    45 DQVKDRGQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFIFFFSCGIPVFFLEVA 109

  Fly   118 LGQMLTIGGLGVF-KIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNW 181
            |||..:.|.:..: ||.|:.:|||.|:.|:..::|:|||:|||||:||.|.|...::||.||.|.
Mouse   110 LGQYSSQGSVTAWRKICPLLQGIGMASVVIESYLNIYYIIILAWALFYLFSSFTWELPWTTCTNS 174

  Fly   182 WNTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLE-LTDPVKEFWERRALQISHGIEEI 245
            |||.:||.            .:|.:       ||..::|.| .|.||.||||||.|.|:.||.::
Mouse   175 WNTEHCVD------------FLNHS-------SARGVSSSENFTSPVMEFWERRVLGITSGIHDL 220

  Fly   246 GNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYI 310
            |::|||||..|||.||:||||||||||.|||||||||.|||::|.|||:||:|||||.:||.||:
Mouse   221 GSLRWELALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLIILLIRGVTLPGAYQGIVFYL 285

  Fly   311 IPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFV 375
            .|:..:|.:.:||:||.||||||:.:..|.|.|||||||:.||.|:|::.:|.:||:||..||||
Mouse   286 KPDLLRLKDPQVWMDAGTQIFFSFAICQGCLTALGSYNKYHNNCYRDSIALCFLNSATSFVAGFV 350

  Fly   376 IFSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTME 440
            :||::|||:.||..|:::||.|||||||:.:|.||..:|.|.:||||||.|||.:||||||..||
Mouse   351 VFSILGFMSQEQGIPISEVAESGPGLAFIAFPKAVTMMPLSQLWSCLFFIMLLFLGLDSQFVCME 415

  Fly   441 GFITAIIDEWPQLLRK--RKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIF 503
            ..:||.:|.:||.|||  |:|:.|..:..|.||:||..:|:|||||||:.|.||.||.|||:|..
Mouse   416 CLVTASMDMFPQQLRKSGRRELLILAISVLCYLMGLLLVTEGGMYIFQLFDYYASSGICLLFLSL 480

  Fly   504 FECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLD-YSY 567
            ||.:.|.|.||.|||||.::|||||.|....|..|...||.:||..|||::.::||:||.: |.|
Mouse   481 FEVICIGWVYGADRFYDNVEDMIGYRPWPLVKISWLFLTPGLCLATFFFSLSKYTPLKYNNVYMY 545

  Fly   568 PWWAHAFGWFTALSSMLYIPLYMFWLWKRTPGELSEKIRALVRID 612
            |.|.::.||..|.|||..:||::...:.:|.|...:::|.|:..|
Mouse   546 PSWGYSIGWLLAFSSMACVPLFIIITFLKTQGSFKKRLRRLITPD 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 295/557 (53%)
Slc6a12NP_598422.2 SLC5-6-like_sbd 49..589 CDD:444915 296/558 (53%)

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