DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and Slc6a3

DIOPT Version :10

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_034150.1 Gene:Slc6a3 / 13162 MGIID:94862 Length:619 Species:Mus musculus


Alignment Length:572 Identity:252/572 - (44%)
Similarity:365/572 - (63%) Gaps:25/572 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LVKIEQLP----DRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGI 109
            |:...|.|    :|.:||.|:||:|||:|.|:.|.|||||||||||||||||::||::.:.:||:
Mouse    47 LINPPQTPVEVQERETWSKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMVIAGM 111

  Fly   110 PMFFMELALGQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVP 174
            |:|:|||||||....|..||:||.|:.||:|:...::|.::..:|.||:|||:.|||.|...|:|
Mouse   112 PLFYMELALGQFNREGAAGVWKICPVLKGVGFTVILISFYVGFFYNVIIAWALHYFFSSFTMDLP 176

  Fly   175 WRTCNNWWNTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQI- 238
            |..|||.||:.||...:...                 |...|.:.....|.|..|::||..|.: 
Mouse   177 WIHCNNTWNSPNCSDAHSSN-----------------SSDGLGLNDTFGTTPAAEYFERGVLHLH 224

  Fly   239 -SHGIEEIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGA 302
             |.||:::|..||:|...|:||.:|.||.:|||||.:||||:.||..|||:||.||:||:|||||
Mouse   225 QSRGIDDLGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGA 289

  Fly   303 LEGIKFYIIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSS 367
            ::||:.|:..:|.:|..:.|||||.||:.||.|:|.|.|:|..||||||||.|:||:|..::||.
Mouse   290 MDGIRAYLSVDFYRLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIITTSINSL 354

  Fly   368 TSMFAGFVIFSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGL 432
            ||..:|||:||.:|:||.:...|:.|||..||||.|::||.|:..||.|..|:.:||.|||.:|:
Mouse   355 TSFSSGFVVFSFLGYMAQKHNVPIRDVATDGPGLIFIIYPEAIATLPLSSAWAAVFFLMLLTLGI 419

  Fly   433 DSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFC 497
            ||....||..||.::||: |||.:.:|:|...:...::|:.|.|:|.||:|:|.:||.:| :|..
Mouse   420 DSAMGGMESVITGLVDEF-QLLHRHRELFTLGIVLATFLLSLFCVTNGGIYVFTLLDHFA-AGTS 482

  Fly   498 LLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKY 562
            :|:.:..|.:.::|.|||.:|.|.||.|.|..|.::|:.||.:.:|...|.|...:||.:.|..|
Mouse   483 ILFGVLIEAIGVAWFYGVQQFSDDIKQMTGQRPNLYWRLCWKLVSPCFLLYVVVVSIVTFRPPHY 547

  Fly   563 LDYSYPWWAHAFGWFTALSSMLYIPLYMFWLWKRTPGELSEKIRALVRIDED 614
            ..|.:|.||:|.||..|.|||..:|:|..:.:...||...||:...:..::|
Mouse   548 GAYIFPDWANALGWIIATSSMAMVPIYATYKFCSLPGSFREKLAYAITPEKD 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 248/554 (45%)
Slc6a3NP_034150.1 SLC5-6-like_sbd 60..613 CDD:444915 249/559 (45%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589 10/28 (36%)

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