DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and Slc6a5

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_006540608.1 Gene:Slc6a5 / 104245 MGIID:105090 Length:831 Species:Mus musculus


Alignment Length:594 Identity:267/594 - (44%)
Similarity:377/594 - (63%) Gaps:24/594 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GHTTSLQSSSPTTTDTSNKQQLVKIEQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNG 92
            |..:.|..|..|||...::|.    ::...||:||||:|||||:||.|:|||||||||||.::||
Mouse   199 GIASVLPGSVATTTIPEDEQG----DENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFQNG 259

  Fly    93 GGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVI 157
            ||||::||::.|.|||:|:||:|::|||..:.|.:.|:|..|..:|.|.|..::|..:.:||.||
Mouse   260 GGAFLIPYLMMLALAGLPIFFLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNVI 324

  Fly   158 LAWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQYERKNLHCWDKIINGTTQKV-------CSVSA 215
            :.:.:||.|.|..:.:||.:|||.|||..|    :.|.....|..:.|...|:       |..:.
Mouse   325 ICYTLFYLFASFVSVLPWGSCNNPWNTPEC----KDKTKLLLDSCVIGDHPKIQIKNSTFCMTAY 385

  Fly   216 LNITSLELTDPV--------KEFWERRALQISHGIEEIGNIRWELAGTLLLVWILCYFCIWKGVK 272
            .|:|.:..|...        :|:::...|:||.|||..|.|||.||..|.|.|::.|..:.||:|
Mouse   386 PNLTMVNFTSQTNKTFVSGSEEYFKYFVLKISAGIEYPGEIRWPLAFCLFLAWVIVYASLAKGIK 450

  Fly   273 WTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFFSYGLG 337
            .:||||||||.||||:|.|||:||:|||||..||.::|.|.:.|||::.||.||.||||||....
Mouse   451 SSGKVVYFTATFPYVVLVILLIRGVTLPGAGAGIWYFITPKWEKLTDATVWKDAATQIFFSLSAA 515

  Fly   338 LGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMAHEQQRPVADVAASGPGLA 402
            .|.|:.|.|||||.||.|:|.|||...||:||:||||||||||||||:|::..:.:||..|||:|
Mouse   516 WGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMANERKVNIENVADQGPGIA 580

  Fly   403 FLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIVCA 467
            |:|||.|:.:||.||.|:.:||.|||.:|||:.|.|:|..:|:|.||:|:.||..|.:|....|.
Mouse   581 FVVYPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSISDEFPKYLRTHKPVFTLGCCI 645

  Fly   468 LSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTV 532
            ..:::|...|||||:|:||::|:||.| :.|:.:..||.|.||:.||:.||.:.|:.|||:.|.:
Mouse   646 CFFIMGFPMITQGGIYMFQLVDTYAAS-YALVIIAIFELVGISYVYGLQRFCEDIEMMIGFKPNI 709

  Fly   533 WWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDYSYPWWAHAFGWFTALSSMLYIPLYMFWLWKRT 597
            :||.||...||.|...:..|:..||.|:.|..|.||.|:...||.....|:::||:.........
Mouse   710 FWKVCWAFVTPTILTFILCFSFYQWEPMTYGSYRYPNWSMVLGWLMLACSVIWIPIMFVIKMYLA 774

  Fly   598 PGELSEKIR 606
            ||...|:::
Mouse   775 PGRFIERLK 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 260/564 (46%)
Slc6a5XP_006540608.1 SLC6sbd_GlyT2 225..821 CDD:271389 260/564 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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