DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gat and Slc6a8

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_598748.1 Gene:Slc6a8 / 102857 MGIID:2147834 Length:640 Species:Mus musculus


Alignment Length:567 Identity:289/567 - (50%)
Similarity:393/567 - (69%) Gaps:25/567 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALG 119
            :|.|.:|:.:||||:|.||.|:||||||||||||||||||.|::||::...:.|||:||:|::||
Mouse    49 VPPRETWTRQMDFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYVLIALVGGIPIFFLEISLG 113

  Fly   120 QMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNT 184
            |.:..|.:.|:.|.|:|||:|||:.|:..:.|.|||::|||..:|...|....:||.||.:.|||
Mouse   114 QFMKAGSINVWNICPLFKGLGYASMVIVFYCNTYYIMVLAWGFYYLVKSFTTTLPWATCGHTWNT 178

  Fly   185 VNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTD---PVKEFWERRALQISHGIEEIG 246
            .:||..:..::  |            .:.|..|:|..:|.|   ||.||||.:.|::|.|:|..|
Mouse   179 PDCVEIFRHED--C------------ANASLANLTCDQLADRRSPVIEFWENKVLRLSTGLEVPG 229

  Fly   247 NIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYII 311
            .:.||:...||..|:|.|||:|||||.|||:|||||.||||:|.:|||||:.|||||:||.:|:.
Mouse   230 ALNWEVTLCLLACWVLVYFCVWKGVKSTGKIVYFTATFPYVVLVVLLVRGVLLPGALDGIIYYLK 294

  Fly   312 PNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVI 376
            |::|||.:.:|||||.|||||||.:|||.|.||||||:|.||.||||:|:..:||.||.|||||:
Mouse   295 PDWSKLGSPQVWIDAGTQIFFSYAIGLGALTALGSYNRFNNNCYKDAIILALINSGTSFFAGFVV 359

  Fly   377 FSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEG 441
            ||::||||.||...::.||.|||||||:.||.||..:|.:|:|:.||||||||:||||||..:||
Mouse   360 FSILGFMATEQGVHISKVAESGPGLAFIAYPRAVTLMPVAPLWAALFFFMLLLLGLDSQFVGVEG 424

  Fly   442 FITAIIDEWP--QLLRKRKEIFIAIVCALSYLVGLTCIT-----QGGMYIFQILDSYAVSGFCLL 499
            |||.::|..|  ...|.::||.:|:.|||.:::.|:.:|     :||||:||:.|.|:.||..||
Mouse   425 FITGLLDLLPASYYFRFQREISVALCCALCFVIDLSMVTDVSGGKGGMYVFQLFDYYSASGTTLL 489

  Fly   500 WLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLD 564
            |..|:|||.::|.||.|||.|.|..||||.|..|.|:||...||.:|:|:|.||||.:.|:.|.:
Mouse   490 WQAFWECVVVAWVYGADRFMDDIACMIGYRPCPWMKWCWSFFTPLVCMGIFIFNIVYYEPLVYNN 554

  Fly   565 -YSYPWWAHAFGWFTALSSMLYIPLYMFWLWKRTPGELSEKIRALVR 610
             |.||||..|.||..||||||.:||::.....|..|.::|:.:.|.:
Mouse   555 TYVYPWWGEAMGWAFALSSMLCVPLHLLGCLLRAKGTMAERWQHLTQ 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 288/564 (51%)
Slc6a8NP_598748.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
SLC6sbd_CT1 52..626 CDD:271397 288/564 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D145627at33208
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100347
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.820

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