DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and slc6a12

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_031754510.1 Gene:slc6a12 / 100492029 XenbaseID:XB-GENE-6033368 Length:612 Species:Xenopus tropicalis


Alignment Length:584 Identity:318/584 - (54%)
Similarity:418/584 - (71%) Gaps:26/584 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 QLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELAL 118
            ::.|||.||:|::|:|||.|..|||||||||||||||||||||.:||:|.||..|||:||:|.||
 Frog    31 EIEDRGQWSNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYLIFLFTCGIPVFFLETAL 95

  Fly   119 GQMLTIGGLGVF-KIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWW 182
            ||..:.||:..: ||.|:|:|||||:.|:..::|:|||||||||:||.|.|..|::||.||||.|
 Frog    96 GQYTSQGGITAWRKICPLFEGIGYASQVIEGYLNIYYIVILAWALFYLFSSFTAELPWATCNNTW 160

  Fly   183 NTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLE-LTDPVKEFWERRALQISHGIEEIG 246
            ||.           ||.|.:  |.::        |.|||| .|..|.||||||.|.:|.|||.:|
 Frog   161 NTE-----------HCIDFV--GKSE--------NFTSLENSTSSVVEFWERRVLHLSEGIEHLG 204

  Fly   247 NIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYII 311
            |:||:||..|||.||:||||||||||.|||||||||.||||:|.||||||:|||||.|||.||:.
 Frog   205 NVRWDLALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYVMLIILLVRGVTLPGAYEGIIFYLK 269

  Fly   312 PNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVI 376
            |:.::|.:.:||:||.|||||||.:..|.|.|||||||:.||.|:|.:.:|.:||.||..|||.|
 Frog   270 PDMTRLQDPQVWMDAGTQIFFSYAICQGCLTALGSYNKYNNNCYRDCIALCFLNSITSFVAGFAI 334

  Fly   377 FSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEG 441
            |||:||||.||..|:::||.|||||||:.||.||..:|.||:||||||.||:.:||||||..:|.
 Frog   335 FSVLGFMAQEQGVPISEVAESGPGLAFIAYPKAVTMMPVSPLWSCLFFLMLIFLGLDSQFVCVES 399

  Fly   442 FITAIIDEWPQLLRK--RKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFF 504
            .:|||:|.:|.:.||  |:|.||..|..:.||:||..:|:||||:||:.|.||.||.|||::..|
 Frog   400 LVTAIVDMFPHVFRKKYRREFFILAVAVICYLLGLILLTEGGMYVFQLFDYYAASGTCLLFVAIF 464

  Fly   505 ECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLD-YSYP 568
            |.:.:.:.||.:||||.|:|||||.|....|:||...|||:|||.|.|::::::|:||.: |.||
 Frog   465 EVICVGYVYGANRFYDNIEDMIGYRPWPLVKYCWLFATPAVCLGTFLFSLIKYSPLKYNNRYVYP 529

  Fly   569 WWAHAFGWFTALSSMLYIPLYMFWLWKRTPGELSEKIRALVRIDEDVTRLREKMLREAYAKEIE 632
            .|.:|.||..|||||:.||:|.|::..||.|..:::::.||....|:.:.::.:...|..|:||
 Frog   530 SWGYAIGWLMALSSMICIPIYAFYIILRTKGSFTQRLKQLVTPHTDLPQPKKYLKDRADPKQIE 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 312/557 (56%)
slc6a12XP_031754510.1 SLC5-6-like_sbd 34..572 CDD:382020 313/558 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D145627at33208
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.110

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