DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and slc6a8

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_002935539.1 Gene:slc6a8 / 100489909 XenbaseID:XB-GENE-986840 Length:644 Species:Xenopus tropicalis


Alignment Length:564 Identity:297/564 - (52%)
Similarity:399/564 - (70%) Gaps:16/564 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 EQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELA 117
            |.:|:|.:|:|:||||:|.||.|:||||||||||||||||||.|::|||:...|.|||:||:|:|
 Frog    53 EGIPERDTWTSQMDFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYILIAILGGIPIFFLEIA 117

  Fly   118 LGQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWW 182
            |||.:..|.:.|:.|||:|:|||:|:.|:..:.|.|||:||.|.|:|...|..|.:||..|||.|
 Frog   118 LGQFMKAGSIAVWNIAPLFQGIGFASVVIVFFCNTYYILILTWGVYYLVKSFSAVLPWSHCNNTW 182

  Fly   183 NTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTD---PVKEFWERRALQISHGIEE 244
            |:.:||..:.:::  |    .|||......    |:|..||.|   |:.||||::.|::|.|:::
 Frog   183 NSPDCVDIFRQED--C----TNGTANSTFG----NLTCNELADKVSPITEFWEKKVLRLSSGLDD 237

  Fly   245 IGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFY 309
            ||:|.|||...|:..|:|.|||:|||||.|||:|||||.||||:|.||||||..||||.|||.:|
 Frog   238 IGSINWELLLCLIGCWLLVYFCVWKGVKSTGKIVYFTATFPYVVLLILLVRGAMLPGATEGIIYY 302

  Fly   310 IIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGF 374
            :.|::|||..::|||||.|||||||.:|||.|.||||||:|.|:.||||.|:..:||.||.||||
 Frog   303 LKPDWSKLGTAQVWIDAGTQIFFSYAIGLGALTALGSYNRFNNDCYKDAFILAVINSGTSFFAGF 367

  Fly   375 VIFSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTM 439
            |:||::||||:||...::.||.|||||||:.||.||..:|.:|:||.||||||||:||||||..:
 Frog   368 VVFSILGFMANEQGVDISKVAESGPGLAFIAYPRAVSLMPVAPLWSALFFFMLLLLGLDSQFVGV 432

  Fly   440 EGFITAIIDEWP--QLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLI 502
            ||.||||:|..|  ...|.::||.:||.||:.:|:.|:.:|:||||:||:.|.|:.||..|||..
 Frog   433 EGLITAILDLLPARYYFRFQREIAVAICCAIMFLIDLSMLTEGGMYVFQLFDYYSASGMTLLWQT 497

  Fly   503 FFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLD-YS 566
            |::||.::|.||.|||.|.|..||||.|..|.|:||...||.:|:.:|.||::.:.|:.|.: |:
 Frog   498 FWQCVVVAWVYGADRFMDDIARMIGYRPFPWMKWCWSFVTPFVCMAIFLFNLINYKPLTYNNSYT 562

  Fly   567 YPWWAHAFGWFTALSSMLYIPLYMFWLWKRTPGELSEKIRALVR 610
            ||||..|.||..||||||.:|:...:......|.|.|:.:.|.:
 Frog   563 YPWWGEAIGWGFALSSMLCVPVTFLYKITCAKGSLRERWQHLTK 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 295/559 (53%)
slc6a8XP_002935539.1 SLC5-6-like_sbd 58..644 CDD:382020 295/559 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D145627at33208
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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