DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and slc6a7

DIOPT Version :10

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_002940131.3 Gene:slc6a7 / 100487063 XenbaseID:XB-GENE-479449 Length:634 Species:Xenopus tropicalis


Alignment Length:576 Identity:263/576 - (45%)
Similarity:362/576 - (62%) Gaps:23/576 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SPTTTDTSNKQQLVKIEQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYI 101
            ||:..|.:.    :.||...|||:||.|:||:||.:|..:||||||||||..|.||||||::||.
 Frog    20 SPSDRDDTE----LDIEYPEDRGNWSGKLDFLLSCIGYCVGLGNVWRFPYRAYTNGGGAFLIPYF 80

  Fly   102 ITLFLAGIPMFFMELALGQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFF 166
            |.|.:.|||:|||||:|||..::|.|.|:||:|:|||:|....::...:.:||.:|:|:.:||.|
 Frog    81 IMLAICGIPLFFMELSLGQFSSLGPLAVWKISPLFKGVGMGMLLIVALVAIYYNMIIAYVLFYLF 145

  Fly   167 MSMRADVPWRTCNNWWNTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFW 231
            .|:.:.:||..|.|||||..|:..:          :|.      .|.|||.:.......|.:|:|
 Frog   146 ASLTSSLPWEHCGNWWNTDLCLDHH----------VIR------ASNSALLVNISNTVSPSEEYW 194

  Fly   232 ERRALQI--SHGIEEIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLV 294
            .|..|.|  |.||.:.|.:||:|...|||.|.:.|.||.||||.:||||||||.|||::|.:||:
 Frog   195 SRYVLHIQGSSGIGDPGQLRWKLCLCLLLSWTIVYLCILKGVKSSGKVVYFTATFPYIILVMLLI 259

  Fly   295 RGITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDAL 359
            ||:||.||..|||||:.|.|..|..|:|||:|..|||:|.|:|.|.|:...|||.|..|:|:|..
 Frog   260 RGVTLEGAWIGIKFYLTPQFEHLLTSKVWIEAALQIFYSLGVGFGGLLTFASYNTFHQNIYRDTF 324

  Fly   360 IVCTVNSSTSMFAGFVIFSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFF 424
            ||...|:.||:.|||.||||:|:|:.|...||..||.:||||||:|||.|:..||.||.||.|||
 Frog   325 IVTLGNAFTSILAGFAIFSVLGYMSQELGVPVDQVAKAGPGLAFVVYPQAMTMLPLSPFWSFLFF 389

  Fly   425 FMLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILD 489
            ||||.:||||||..||..:|||.||:|..||.:|.:|.||:|...:|:||...|.||||...:||
 Frog   390 FMLLTLGLDSQFAFMETIVTAITDEFPYYLRPKKAVFSAIICVALFLLGLILATDGGMYWLVLLD 454

  Fly   490 SYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNI 554
            .|: :||.||.::...|:|:|..||:..|...|:.|:|:.|.:::|.||...:|...:.:..::|
 Frog   455 DYS-AGFGLLVIVITFCLSVSRVYGIKNFCRDIQMMLGFKPGLYFKACWIFLSPVTLMCLLAYSI 518

  Fly   555 VQWTPVKYLDYSYPWWAHAFGWFTALSSMLYIPLYMFWLWKRTPGELSEKIRALVR 610
            :::.|.:|..|.:|.|:.|.|....|.|.:.||:.|.....:..|.|.|:||...|
 Frog   519 LKYQPSQYGSYKFPLWSEALGILMGLLSCMMIPIGMLVAILKEEGSLWERIRQASR 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 257/555 (46%)
slc6a7XP_002940131.3 SLC5-6-like_sbd 37..581 CDD:444915 257/555 (46%)

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