DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and slc6a15

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_002931668.1 Gene:slc6a15 / 100380162 XenbaseID:XB-GENE-975885 Length:730 Species:Xenopus tropicalis


Alignment Length:701 Identity:222/701 - (31%)
Similarity:350/701 - (49%) Gaps:129/701 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ESIE--MSKELGHTTSLQSSSPTTTDTSNKQQLVKIEQLPD----RGSWSSKMDFILSVVGLAIG 77
            ||::  :|.|.....|.:.|....:|..:|.:  .||:..|    |.:|:||:.:||:.||.::|
 Frog    18 ESVKDLLSNEDSGDESFKKSELVVSDDVDKDR--DIEEGSDIDDERPAWNSKLQYILAQVGFSVG 80

  Fly    78 LGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVFK-IAPIFKGIGY 141
            |||||||||||.||||||:::||:|.|.|.|||:||:||::||.:..|.:||:. |:|...|||:
 Frog    81 LGNVWRFPYLCQKNGGGAYLVPYLILLLLIGIPVFFLELSVGQRIRRGSIGVWNYISPKMGGIGF 145

  Fly   142 AAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQYERKNLHCWDKIINGT 206
            |:.::..::.:||.||:.|::|||..|.:..:||..|....|..|...:.|              
 Frog   146 ASCIVCLFVALYYNVIIGWSLFYFSQSFQHPLPWDQCPLVKNASNTFVEPE-------------- 196

  Fly   207 TQKVCSVSALNITSLELTDPVKEFWERRALQISHGIEEIGNIRWELAGTLLLVWILCYFCIWKGV 271
                |          |.:.....:|.|.||.||:.|.|.|.:.|::...||..|||....:.||:
 Frog   197 ----C----------EKSSATTYYWYREALNISNSITEGGGLNWKMTLCLLAAWILVCLAMIKGI 247

  Fly   272 KWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFFSYGL 336
            :.:|||:||::|||||:||..|||.:.|.|:::||:....|....:...:||.:|.||:||:.||
 Frog   248 QSSGKVMYFSSLFPYVVLTCFLVRALLLNGSVDGIRHMFTPKLEIMLEPKVWREAATQVFFALGL 312

  Fly   337 GLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMA----------------- 384
            |.|.::|..||||..||.:.||::|..:|..||:.|..|:|:|:||.|                 
 Frog   313 GFGGVIAFSSYNKRDNNCHFDAVLVSFINFFTSVLATLVVFAVLGFKANIMNENCISKNTVKIVK 377

  Fly   385 -------------HE----------------------------------QQRPVADVAASGPGLA 402
                         |.                                  |.....:.:..|.|||
 Frog   378 YLEAGNLSWSNVPHHVNFSSMSAQDYNLVYYIFQKIKEEEFDSLGLDSCQIEDELNKSVQGTGLA 442

  Fly   403 FLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIVCA 467
            |:.:..|:...|.||.||.:||.||:.:||.|.|.|:||.||.|:|.:    :.|||......|.
 Frog   443 FIAFTEAMTHFPASPFWSVMFFLMLVNLGLGSMFGTIEGIITPIVDTF----KVRKEPLTVGCCL 503

  Fly   468 LSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTV 532
            |::.:||..:.:.|.|...:.|.|:.: ..||.::..|.|:|:|.||:|:|.|.:|||:|:.|..
 Frog   504 LAFCIGLLFVQRSGNYFVTMFDDYSAT-LPLLIVVILENVAIAWVYGIDKFMDDLKDMLGFTPYK 567

  Fly   533 WWKFCWCVTTPAICLGVFFFNIVQ--WTPVKYLDY----------SYPWWAHAFGWFTALSSMLY 585
            ::.:.|...:|.:...:...:|||  ::|..|..:          |||.|..|......:.::|.
 Frog   568 YYYYMWKYISPVLLTILLMASIVQMGFSPPGYYAWIAEKASEERISYPPWGLAVCISLIVFALLP 632

  Fly   586 IPLYMFW----LWKRTPGELS-------EKIRALVRIDEDVTRLREKMLRE 625
            :|:....    |...:.|.|:       :.|:....:::|.:.:.||:..|
 Frog   633 VPVVFIVRTCNLIDDSTGSLASVSYKRGKMIKETSNLEDDASLIHEKIQSE 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 207/640 (32%)
slc6a15XP_002931668.1 SLC5-6-like_sbd 61..640 CDD:382020 203/611 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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