DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and XB5944457

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001106493.1 Gene:XB5944457 / 100127682 XenbaseID:XB-GENE-5944458 Length:599 Species:Xenopus tropicalis


Alignment Length:621 Identity:344/621 - (55%)
Similarity:446/621 - (71%) Gaps:46/621 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYTNSASDGDGGGDVCKHESIEMSKELGHTTSLQSSSPTTTDTSN----KQQLVKIEQLPDRGSW 61
            |.||.....||          ::|.|:       |.:|.|.|...    |.|..|.|:: :|.:|
 Frog     1 MATNGTKVADG----------QISTEV-------SEAPVTNDKPKTLVVKVQKKKTEEV-ERDTW 47

  Fly    62 SSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGG 126
            ..:.||::|.||.||||||||||||||.|||||||::||.:||..||:|:|.:|.:|||..:|||
 Frog    48 KGRFDFLMSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGG 112

  Fly   127 LGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQY 191
            |||:|:||:|||:|.||||:|.|:|:|||||:|||::|.:.|....:||:.|:|.|||..|.|.|
 Frog   113 LGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIIAWAIYYLYNSFTTTLPWKHCDNSWNTERCFSNY 177

  Fly   192 ERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQISHGIEEIGNIRWELAGTL 256
                                  |..|.|:  :|..|.|||||...|::.|:|:.|.|||.||.||
 Frog   178 ----------------------SIANTTN--MTSAVVEFWERNMHQMTDGLEKPGQIRWPLAITL 218

  Fly   257 LLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSE 321
            .:.|:|.||||||||.||||||||:|.:||::|.||..||:||||||:||.|||.|.||||::||
 Frog   219 AIAWVLVYFCIWKGVGWTGKVVYFSATYPYIMLVILFFRGVTLPGALDGILFYITPKFSKLSDSE 283

  Fly   322 VWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMAHE 386
            ||:||.||||||||||||:|:||||||:|.||||:|::|||.:||.|||||||||||::|||||.
 Frog   284 VWLDAATQIFFSYGLGLGSLIALGSYNRFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHV 348

  Fly   387 QQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWP 451
            .:||:..|||||||||||.||.||.|||.||:|:.|||.|||::|:||||||:||||||::||:|
 Frog   349 TKRPIEQVAASGPGLAFLAYPEAVTQLPISPLWAVLFFSMLLMLGIDSQFCTVEGFITALVDEFP 413

  Fly   452 QLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVD 516
            :|||.|:|||||:||.:||||||:.|||||:|:|::.|.|:.||..||:|:||||:||||||||:
 Frog   414 KLLRTRREIFIAVVCVVSYLVGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECISISWCYGVN 478

  Fly   517 RFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDYSYPWWAHAFGWFTALS 581
            ||||.|::|:||.|.:|||.||...||.|..|||.|:.||.||:....|.:|.|....|||.|||
 Frog   479 RFYDNIEEMVGYRPCIWWKLCWSFFTPIIVAGVFLFSAVQMTPLTMGSYVFPSWGQGVGWFMALS 543

  Fly   582 SMLYIPLYMFWLWKRTPGELSEKIRALVRIDEDVTR 617
            ||:.||.||.:|:....|.|.::::.:::..|:|.|
 Frog   544 SMVLIPGYMVYLFLSLKGSLKQRLQVMIQPTEEVVR 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 326/552 (59%)
XB5944457NP_001106493.1 SLC6sbd_GAT1 2..599 CDD:212075 343/620 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 720 1.000 Domainoid score I116
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H2290
Inparanoid 1 1.050 730 1.000 Inparanoid score I612
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D145627at33208
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 1 1.000 - - otm48830
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3352
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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