DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and slc6a8l

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_012815966.1 Gene:slc6a8l / 100127575 XenbaseID:XB-GENE-5768780 Length:654 Species:Xenopus tropicalis


Alignment Length:562 Identity:296/562 - (52%)
Similarity:398/562 - (70%) Gaps:14/562 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 VKIEQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFM 114
            ||| .:|:|.:|:.:||||:|.||.|:||||||||||||||||||.|::||::.:|:.|||:||:
 Frog    54 VKI-PIPERETWTRQMDFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYLLIVFVGGIPVFFL 117

  Fly   115 ELALGQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCN 179
            |:||||.:..||:..:.|||:|||:|:|:.|:..:.|.|||:||.|.::|...|....:||.||.
 Frog   118 EIALGQFMKQGGIAAWNIAPLFKGLGFASMVIVFFCNTYYIMILVWGLYYLVHSFTNTLPWATCG 182

  Fly   180 NWWNTVNCVSQYERKNLHCWDKIINGTTQKVC-SVSALNITSLELTD---PVKEFWERRALQISH 240
            |.||:..|...:...  ||    .||:...|. |.:.:||:...|.:   ||.|||||:.||||.
 Frog   183 NPWNSKECTEVFLVD--HC----NNGSLANVTDSGTLVNISCDALVNKRSPVIEFWERKVLQISG 241

  Fly   241 GIEEIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEG 305
            |:.|.|.:.|::...|:..|::.|||||||||.||||||||||||||:|.:||..|:||||||:|
 Frog   242 GLNEPGQLNWQMILCLMATWVIVYFCIWKGVKSTGKVVYFTALFPYVVLIVLLAHGVTLPGALDG 306

  Fly   306 IKFYIIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSM 370
            |.:|:.||:|||..::|||||.|||||||.:|||.|.||||||:|.||.|:||.|:..:||:||.
 Frog   307 IVYYLKPNWSKLAEAQVWIDAGTQIFFSYAIGLGALTALGSYNRFHNNCYRDAYILAAINSTTSF 371

  Fly   371 FAGFVIFSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQ 435
            |||||:|||:||||.||...::.||.|||||||:.||.||..:|.:|:|:.|||||||::|||||
 Frog   372 FAGFVVFSVLGFMASEQGVHISKVAESGPGLAFIAYPKAVTLMPFAPIWAALFFFMLLILGLDSQ 436

  Fly   436 FCTMEGFITAIIDEWPQLLR--KRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCL 498
            |..:|||||.|:|.:||.:.  .|:|:..|:.|.:.:::.|:.:|:||||:||:.|.|:.||..|
 Frog   437 FVGVEGFITGIMDLFPQPINGFVRREVTAALCCLVCFIIDLSMVTEGGMYVFQLFDYYSASGITL 501

  Fly   499 LWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKY- 562
            ||..|:|||.|:|.||.|||.|.|..||||.|..:.|:||.|.||.:|:|:|.|::|.:.|:.| 
 Frog   502 LWQAFWECVVIAWVYGADRFMDDIARMIGYRPLPYMKWCWSVLTPLVCVGIFVFHVVNYKPLTYN 566

  Fly   563 LDYSYPWWAHAFGWFTALSSMLYIPLYMFWLWKRTPGELSEK 604
            ..|.||||..|.||..||:|||.|||.:.....|:.|.|.|:
 Frog   567 KSYVYPWWGEAIGWSLALASMLCIPLTVVCKMLRSKGSLRER 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 292/554 (53%)
slc6a8lXP_012815966.1 SLC6sbd_CT1 61..654 CDD:271397 292/554 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D145627at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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