DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mav and GDF5

DIOPT Version :9

Sequence 1:NP_524626.1 Gene:mav / 43804 FlyBaseID:FBgn0039914 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_000548.2 Gene:GDF5 / 8200 HGNCID:4220 Length:501 Species:Homo sapiens


Alignment Length:231 Identity:53/231 - (22%)
Similarity:100/231 - (43%) Gaps:32/231 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   481 WIEFDVTKAVRSWLNKSHENLGIEIQC-DKCKSIGARILSDFSPSTPPRSTASSDEHLNLMPVLN 544
            |..||:.|..|::.|.:  .|.:|::. ::.:::..|.|.        ...|:...|...:.:: 
Human   291 WEVFDIWKLFRNFKNSA--QLCLELEAWERGRAVDLRGLG--------FDRAARQVHEKALFLV- 344

  Fly   545 IIGHGTLNSQQHGDADIHQIMLTNNRSDQYVH-------HRSNHDSTWRKDKWTNNCYKLHQRCC 602
                  ....:..|...::|...:.:.|:.|:       .:.......|:.|..:.  .|..||.
Human   345 ------FGRTKKRDLFFNEIKARSGQDDKTVYEYLFSQRRKRRAPLATRQGKRPSK--NLKARCS 401

  Fly   603 RNQLDVAFKSIKGFEFILQPKVFDAGYCHGRC--PPR-HNPAHHHALLQSLIWQEDHKRAPRPCC 664
            |..|.|.||.:...::|:.|..::|.:|.|.|  |.| |....:||::|:|:...|.:..|..||
Human   402 RKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCC 466

  Fly   665 TPSKLEMLEILHVDENHSDKLKISTWSDMQVVECAC 700
            .|::|..:.||.:|.  ::.:....:.||.|..|.|
Human   467 VPTRLSPISILFIDS--ANNVVYKQYEDMVVESCGC 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mavNP_524626.1 TGFb_propeptide <442..506 CDD:279078 8/24 (33%)
TGF_beta 599..700 CDD:278448 33/103 (32%)
GDF5NP_000548.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..169
TGFb_propeptide 145..344 CDD:279078 12/62 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..265
TGFB 400..501 CDD:214556 33/103 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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