DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mav and ndr1

DIOPT Version :9

Sequence 1:NP_524626.1 Gene:mav / 43804 FlyBaseID:FBgn0039914 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_571041.1 Gene:ndr1 / 799352 ZFINID:ZDB-GENE-990415-256 Length:392 Species:Danio rerio


Alignment Length:383 Identity:79/383 - (20%)
Similarity:138/383 - (36%) Gaps:103/383 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   368 LHFPLTNAQDANFHHDK--IDEANVRLMLLYSS------SLATNFRRGPGSRKNKISQISGNDNI 424
            |:..|....:.:|.|:.  :.|::..|.|:..|      ..|..|         .:|.||.:|::
Zfish    62 LYRTLLTGDEKHFSHENPTLYESDSVLSLVAKSCHQVGDKFAVTF---------DMSSISASDDV 117

  Fly   425 ERHCNFGDVNLNQSNKNSSQQLTLKVYQLLSAN-RRRKITSRKIEFGNVGFQET----RTQWIEF 484
            :|    .::.:...:..|  :|.:.:|...:.. .|......::..|.:.....    |:.|..|
Zfish   118 QR----AELRIRLPHLRS--ELEVDIYHASTPECERSPCEEVRVHLGTLNANPINSTFRSSWRIF 176

  Fly   485 DVTKAVRSWLNKSHENLGIEIQCDKCKSIGARILSDFSPSTPPRSTASSDEHLNLMPVLNIIGHG 549
            ::|..::.||::|.                 |:..:.....||.:......|           |.
Zfish   177 NITALLKYWLHQSE-----------------RVPFEEPTQMPPMAEGHKSVH-----------HP 213

  Fly   550 TLN-------SQQHGDADIHQIMLTNNRSDQYV--------------HHRSNHDSTWRKDKWTNN 593
            |.|       |:|: .|....::.|...| :||              .||.||    |.|....:
Zfish   214 TANRVMMVVYSKQN-RAKTSTLIRTAEHS-KYVALDRAGGGSEPVPRRHRRNH----RTDDRVRD 272

  Fly   594 CYK------LHQ------RCCRNQLDVAFKSIKGFEFILQPKVFDAGYCHGRCP----PRHNPAH 642
            ...      .|:      .|.:..:.|.|..|...::|:.||.::|..|.|.||    ....|. 
Zfish   273 AAAGMIPGVSHEGGEKKPLCKKVDMWVDFDQIGWSDWIVYPKRYNAYRCEGSCPTPVDETFTPT- 336

  Fly   643 HHALLQSLIWQEDHKRAPRPCCTPSKLEMLEILHVDENHSDKLKISTWSDMQVVECAC 700
            :||.:|||:......|.|...|.|::|..|.:|:.:   :.|:.:.....|.|.||.|
Zfish   337 NHAYMQSLLKLHHPDRVPCLSCVPTRLAPLSMLYYE---NGKMVMRHHEGMVVAECGC 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mavNP_524626.1 TGFb_propeptide <442..506 CDD:279078 12/68 (18%)
TGF_beta 599..700 CDD:278448 30/110 (27%)
ndr1NP_571041.1 TGFb_propeptide 56..190 CDD:279078 26/142 (18%)
TGF_beta 291..391 CDD:278448 30/103 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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