DRSC/TRiP Functional Genomics Resources

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Protein Alignment mav and Tgfb1

DIOPT Version :10

Sequence 1:NP_524626.1 Gene:mav / 43804 FlyBaseID:FBgn0039914 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_067589.1 Gene:Tgfb1 / 59086 RGDID:69051 Length:390 Species:Rattus norvegicus


Alignment Length:270 Identity:78/270 - (28%)
Similarity:121/270 - (44%) Gaps:51/270 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   442 SSQQLTLKVYQLLSANRRRKITSRKIEFGNVGFQETRT-QWIEFDVTKAVRSWLNKSHENLGIEI 505
            |:.:..:::||..|.|..|.:       ||.....|.| :|:.||||..||.|||:..   ||: 
  Rat   162 STVEQHVELYQKYSNNSWRYL-------GNRLLTPTDTPEWLSFDVTGVVRQWLNQGD---GIQ- 215

  Fly   506 QCDKCKSIGARILSDFSPSTPPRSTASSDEHLNLMPVLNIIGHGTLNSQQHGD-ADIHQ------ 563
                    |.|    ||      :..|.|...|   ||::..:| ::.::.|| ..||.      
  Rat   216 --------GFR----FS------AHCSCDSKDN---VLHVEING-ISPKRRGDLGTIHDMNRPFL 258

  Fly   564 -IMLTNNRSDQYVHHRSNHDSTWRKDKWTNNCY-KLHQRCCRNQLDVAFKSIKGFEFILQPKVFD 626
             :|.|.....|:: |.|.|    |:...||.|: ...:.||..||.:.|:...|:::|.:||.:.
  Rat   259 LLMATPLERAQHL-HSSRH----RRALDTNYCFSSTEKNCCVRQLYIDFRKDLGWKWIHEPKGYH 318

  Fly   627 AGYCHGRCPPRHNPAHHHALLQSLIWQEDHKRAPRPCCTPSKLEMLEILHVDENHSDKLKISTWS 691
            |.:|.|.||...:....::.:.:|..|.:...:..|||.|..||.|.|::.   ...|.|:...|
  Rat   319 ANFCLGPCPYIWSLDTQYSKVLALYNQHNPGASASPCCVPQALEPLPIVYY---VGRKPKVEQLS 380

  Fly   692 DMQVVECACS 701
            :|.|..|.||
  Rat   381 NMIVRSCKCS 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mavNP_524626.1 TGFb_propeptide <438..518 CDD:480997 24/76 (32%)
TGF_beta_maverick 598..700 CDD:381633 30/101 (30%)
Tgfb1NP_067589.1 TGFb_propeptide 30..261 CDD:459906 36/131 (27%)
Straightjacket domain. /evidence=ECO:0000250|UniProtKB:P07200 30..74
Arm domain. /evidence=ECO:0000250|UniProtKB:P07200 75..271 39/141 (28%)
Bowtie tail. /evidence=ECO:0000250|UniProtKB:P01137 226..252 8/29 (28%)
Cell attachment site. /evidence=ECO:0000255 244..246 0/1 (0%)
TGF_beta_TGFB1 292..390 CDD:381654 30/100 (30%)
Blue background indicates that the domain is not in the aligned region.

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