DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mav and amh

DIOPT Version :9

Sequence 1:NP_524626.1 Gene:mav / 43804 FlyBaseID:FBgn0039914 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_001007780.1 Gene:amh / 493624 ZFINID:ZDB-GENE-050706-192 Length:549 Species:Danio rerio


Alignment Length:689 Identity:138/689 - (20%)
Similarity:227/689 - (32%) Gaps:224/689 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 LYKIWFILILLM---------STQHQVSGHGIFRQTSSSKAVFSYYQPKENITFTNLQLQNLENE 149
            |::..|.|:|:|         :.:|:       .|.::.|.     .|...:....|::::|...
Zfish     2 LFQTRFGLMLMMTVAIGSYCATVRHE-------EQDNNPKV-----NPLSELNGDQLEVRDLACV 54

  Fly   150 AKRLETNQHPIIRAKSTP---KMGLKNVFESFSKQS-----RDSIYNASSNKYSLINVSQSKNFP 206
            .::..|:||   ..:.||   :....|.|.|..|.:     .|.:...||...|    ||..:..
Zfish    55 HRQQPTDQH---ATEDTPFNKEQKTLNEFLSALKSAGELGKMDFLGTCSSETQS----SQVSHLV 112

  Fly   207 Q-LFNKKLSVQWIN-TVPIQSRQTRETRDIGLETKRHSKP------------------SKRV--- 248
            | :..|:..::.:: |..|......|...:.|...:||.|                  |.||   
Zfish   113 QSVLQKQSGLKGVHATEDIWDADNEEGITLTLTFPKHSLPAGPASVMLLFSVNPVKGDSLRVQFN 177

  Fly   249 --------------DETRLK-----------HLVLKGLGIKKLPD-MRKVNISQAEYSSKYIEYL 287
                          :.||..           ||.||.:....:.| .||:::|:          |
Zfish   178 SQSIHPNTQTVCISESTRFLIVTGGWSHGHIHLKLKTMVETSMDDNRRKLSVSE----------L 232

  Fly   288 SRLRSNQEKGNSYFNNFMGASFTRDLHFLSITTNGFNDISNKRL-RHRRSLKKINRLNQNPKKHQ 351
            :.:...:..|:|       .:....|.|||       |:....| |||  :.:..||   |.:  
Zfish   233 NEVLMRKVDGSS-------TTIKPVLLFLS-------DLDEPHLKRHR--IPQDERL---PSR-- 276

  Fly   352 NYGDLLRGEQDTMNILLHFPLTNAQDANFHHDKIDEANVRLMLLYSSSLATNFRRGPGSRKNKIS 416
            .|..|...::...:||.....|..||        |.:.|.|..|:|   ....|.|..|.:   |
Zfish   277 TYLFLCELQKFLRDILPQSKSTTPQD--------DPSAVSLDTLHS---LPPLRLGVSSTE---S 327

  Fly   417 QISGNDNIERHCNFGDVNLNQSNKNSSQQLTLKVYQLLSANRRRKITSRKIEFGNVGFQETRTQW 481
            .:||..|......|......|..:....::||. ..|||..|.|             ..|...|.
Zfish   328 LLSGLVNSSTPTVFVFPQRQQGLQTHRVEVTLD-SPLLSVLRMR-------------LDEAMAQV 378

  Fly   482 IEFDVTKAVRSWLNKSHENLGIEIQCDKCKSIGARILSDFSPSTPPRSTASSDEHLNLMPVLNII 546
            .:.:..:.:...|.|..|                  ||..||.......|:.|            
Zfish   379 KQQEAGRKMIDRLQKLTE------------------LSALSPDGEDSEAATKD------------ 413

  Fly   547 GHGTLNSQQHGDADIHQIMLTNNRSDQYVHHRSNHDSTWRKDKWTNNCYKLHQRCCR-------- 603
                     |.:|....::|.  ::.|.|.      |.|..::        .||..|        
Zfish   414 ---------HKEAQYRSVLLL--KALQMVL------SNWESER--------AQRAARADEDGPSA 453

  Fly   604 -NQLDVAFKSIKGFEFILQPKVFDAGYCHGRCP-PRHNPAHHHALLQSLIWQEDHKRAPRP---- 662
             ||..:...|:...:|.|:|...:...|.|.|. |.:|..:|..||.|      |.::.:|    
Zfish   454 SNQCHLQSLSVSLRKFFLEPSRANINNCEGTCGFPLNNANNHAVLLNS------HIQSGQPVNRS 512

  Fly   663 -CCTPSKLEMLEILHVDENHSDKLKISTWSDMQVVECAC 700
             ||.|.:.:.|.::.::   |:...||..:::...:|.|
Zfish   513 LCCVPVEYDDLCVIELE---SETTNISYKTNVVATKCEC 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mavNP_524626.1 TGFb_propeptide <442..506 CDD:279078 12/63 (19%)
TGF_beta 599..700 CDD:278448 28/115 (24%)
amhNP_001007780.1 AMH_N 74..439 CDD:282552 93/474 (20%)
TGF_beta 455..548 CDD:278448 25/101 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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