DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mav and dpp

DIOPT Version :9

Sequence 1:NP_524626.1 Gene:mav / 43804 FlyBaseID:FBgn0039914 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster


Alignment Length:695 Identity:143/695 - (20%)
Similarity:250/695 - (35%) Gaps:199/695 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 KIWFILILLMSTQHQV-----------------------------SGHGIFRQ------TSSSKA 125
            :.|.:|:.:::|...:                             ||.|..|.      .|:|.|
  Fly     2 RAWLLLLAVLATFQTIVRVASTEDISQRFIAAIAPVAAHIPLASASGSGSGRSGSRSVGASTSTA 66

  Fly   126 VFSYYQP-KENITFTNLQLQNLENEAKRLETNQHPIIRAKSTPKMGLKNVFESFSKQSRDSIYNA 189
            :...:.| .|..:|::      .:::.|.:||:.|       .|......|....|...|.:.| 
  Fly    67 LAKAFNPFSEPASFSD------SDKSHRSKTNKKP-------SKSDANRQFNEVHKPRTDQLEN- 117

  Fly   190 SSNKYSLINVSQSKNFPQLFNKKLSVQWINTVPIQSRQTRETRDIGLETKRHSKPSKRVDETRLK 254
            |.||        ||   ||.||                           ..|:|.:  |.|.|..
  Fly   118 SKNK--------SK---QLVNK---------------------------PNHNKMA--VKEQRSH 142

  Fly   255 HLVLKGLGIKKLPDMRKVNISQAEYSSKYIEYLSRLRSNQEKG-NSYFNNFMGASFTRDLHFLSI 318
            |        ||....|.....||..|::         |:|... .|.|.........|::..:::
  Fly   143 H--------KKSHHHRSHQPKQASASTE---------SHQSSSIESIFVEEPTLVLDREVASINV 190

  Fly   319 TTN--------GFNDISNKRL-------------RHRRSLKKINRLNQNPKKHQN---------- 352
            ..|        |.:..|.:.|             ...:||..:..:.:.||..::          
  Fly   191 PANAKAIIAEQGPSTYSKEALIKDKLKPDPSTLVEIEKSLLSLFNMKRPPKIDRSKIIIPEPMKK 255

  Fly   353 -YGDLLRGEQDTMNILLHFPLTNAQDA--NFHH--DKIDEANVRLMLLYSSSLATNFRRGPGSRK 412
             |.:::..|.|::||.....||.:.:.  :|.|  .|||:   |....:...|..:.:..|...|
  Fly   256 LYAEIMGHELDSVNIPKPGLLTKSANTVRSFTHKDSKIDD---RFPHHHRFRLHFDVKSIPADEK 317

  Fly   413 NKISQISGNDNIERHCNFGDVNLNQSNKNSSQQLTLKVYQL--LSANRRRKITSRKIEFGNVGFQ 475
            .|.:::    .:.|......|..::|:.|.::...| ||.:  :....:|:.:...::...|...
  Fly   318 LKAAEL----QLTRDALSQQVVASRSSANRTRYQVL-VYDITRVGVRGQREPSYLLLDTKTVRLN 377

  Fly   476 ETRTQWIEFDVTKAVRSWLNKSHENLGIEIQCDKCKSIGARILSDFSPSTPPRSTASSDE-H--- 536
            .|.|  :..||..||..||.....|.|:.::....:|:..      :|....|...|:|| |   
  Fly   378 STDT--VSLDVQPAVDRWLASPQRNYGLLVEVRTVRSLKP------APHHHVRLRRSADEAHERW 434

  Fly   537 LNLMPVLNIIGHGTLNSQQHGDADIHQIM--------LTNNRSDQYVHHRSNHDSTWRKDKWTNN 593
            .:..|:|    ....:..:|....|..:.        ..|.|..:....|.|||.|         
  Fly   435 QHKQPLL----FTYTDDGRHKARSIRDVSGGEGGGKGGRNKRQPRRPTRRKNHDDT--------- 486

  Fly   594 CYKLHQRCCRNQLDVAFKSIKGFEFILQPKVFDAGYCHGRCP---PRHNPAHHHALLQSLIWQED 655
                   |.|:.|.|.|..:...::|:.|..:||.||||:||   ..|..:.:||::|:|:...:
  Fly   487 -------CRRHSLYVDFSDVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMN 544

  Fly   656 HKRAPRPCCTPSKLEMLEILHVDENHSDKLKISTWSDMQVVECAC 700
            ..:.|:.||.|::|:.:.:|::::..:..||  .:.:|.||.|.|
  Fly   545 PGKVPKACCVPTQLDSVAMLYLNDQSTVVLK--NYQEMTVVGCGC 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mavNP_524626.1 TGFb_propeptide <442..506 CDD:279078 15/65 (23%)
TGF_beta 599..700 CDD:278448 32/103 (31%)
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 49/238 (21%)
TGFB 487..588 CDD:214556 33/103 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466516
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.