DRSC/TRiP Functional Genomics Resources

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Protein Alignment mav and Lefty2

DIOPT Version :9

Sequence 1:NP_524626.1 Gene:mav / 43804 FlyBaseID:FBgn0039914 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_796073.1 Gene:Lefty2 / 320202 MGIID:2443573 Length:368 Species:Mus musculus


Alignment Length:474 Identity:85/474 - (17%)
Similarity:157/474 - (33%) Gaps:151/474 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 PSKRVDETRLKHLVLKGLGIKKLPDMRKVNISQ----AEYSSKYIEYLSRLRSNQEKGNSYFNNF 304
            |...:.|.::...:|:.|.:.:.|.:...::.:    ....|:|:..|....:::.:|..:..||
Mouse    18 PGAAMTEEQVLSSLLQQLQLSQAPTLDSADVEEMAIPTHVRSQYVALLQGSHADRSRGKRFSQNF 82

  Fly   305 MGASFTRDLHFLSITTNGFNDISNKRLRHRRSLKKINRLNQNPKKHQNYGDLLRGEQDTMNILLH 369
            ...:                                             |..|..|..|.  ||.
Mouse    83 REVA---------------------------------------------GRFLMSETSTH--LLV 100

  Fly   370 FPLTNAQDANFHHDKIDEANVRLML--LYSSSLATNFRRGPGSRKNKISQISGNDNIERHCNFGD 432
            |.:......|   .::.:|.:||..  :..::|....|..|.|.:.:::       ||       
Mouse   101 FGMEQRLPPN---SELVQAVLRLFQEPVPRTALRRFERLSPHSARARVT-------IE------- 148

  Fly   433 VNLNQSNKNSSQQLTLKVYQLLSANRRRKITSRKIEFGNVGFQETRTQWIEFDVTKAVRSW--LN 495
                          .|:|.: ..:||...|.||.:.....|       |..||||:||..|  |:
Mouse   149 --------------WLRVRE-DGSNRTALIDSRLVSIHESG-------WKAFDVTEAVNFWQQLS 191

  Fly   496 KSHENLGIEIQCDKCKSIG-----ARILSDFSPSTPPRSTASSDEHLNLMPVLNIIGHGTLNSQQ 555
            :..:.|.:::...: :.:|     |..|..|:....|......:..|.| ..|::..:|.     
Mouse   192 RPRQPLLLQVSVQR-EHLGPGTWSAHKLVRFAAQGTPDGKGQGEPQLEL-HTLDLKDYGA----- 249

  Fly   556 HGDADIHQIMLTNNRSDQYVHHRSNHDSTWRKDKWTNNCYKLHQRCCRNQLDVAFKSIKGFE-FI 619
            .|:.| .::.:|..                             .||||.::.:..:.:|..| :|
Mouse   250 QGNCD-PEVPVTEG-----------------------------TRCCRQEMYLDLQGMKWAENWI 284

  Fly   620 LQPKVFDAGYCHGRCPPRHNPAHHHALLQSLI--WQEDHKRAPRPCCTPSKLEMLEILHVDENHS 682
            |:|..|....|.|.|         ..|.:||.  |.   ...||.|.......:..|:.|.|...
Mouse   285 LEPPGFLTYECVGSC---------LQLPESLTIGWP---FLGPRQCVASEMTSLPMIVSVKEGGR 337

  Fly   683 DKLKISTWSDMQVVECACS 701
            .:.::.:..:|:|..|:|:
Mouse   338 TRPQVVSLPNMRVQTCSCA 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mavNP_524626.1 TGFb_propeptide <442..506 CDD:279078 18/65 (28%)
TGF_beta 599..700 CDD:278448 26/103 (25%)
Lefty2NP_796073.1 TGFb_propeptide <106..211 CDD:279078 29/144 (20%)
TGF_beta 263..355 CDD:278448 26/103 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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