DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mav and tig-3

DIOPT Version :10

Sequence 1:NP_524626.1 Gene:mav / 43804 FlyBaseID:FBgn0039914 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_001391131.1 Gene:tig-3 / 266879 WormBaseID:WBGene00021594 Length:305 Species:Caenorhabditis elegans


Alignment Length:422 Identity:71/422 - (16%)
Similarity:129/422 - (30%) Gaps:149/422 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 FTRDLHFLSITTNGFNDISNKRLRHRRSLKKINRLNQNP----------------KKHQNYGDLL 357
            |||..:...||....|..|....|.:|.|.....|:..|                :||..||.:|
 Worm     4 FTRFHYCFVITIISINASSLSIERQKRQLLSALNLSSRPPLIHQAPVIPDSMSTSRKHDLYGGVL 68

  Fly   358 RGEQDTMNILLHFPLTNAQDANFHHDKID-EANVRLMLLYSSSLATNFRRGPGSRKNKISQISGN 421
                                     |||. |.|.:     |.:..|     |.|......|.|.|
 Worm    69 -------------------------DKITLEPNRK-----SWTCLT-----PESLVKDCFQYSIN 98

  Fly   422 DNIERHCNFGDVNLNQSNKNSSQQLTLKVYQLLSANRRRKITSRKIEFGNVGF------QETRTQ 480
             :|........:.::..:.|    :::.||::...            ||.:.:      :||..:
 Worm    99 -SINHEILSASLIIDPKDTN----ISIVVYEVDEL------------FGELQYVDRFEIRETLDK 146

  Fly   481 WIEFDVTKAVRSWLNKSHENLGIEIQCDKCKSIGARILSDFSPSTPPRSTASSDEHLNLMPVLNI 545
            : .||::.....|:.:...:..|:|:.                     :.:::...:|.:.||. 
 Worm   147 Y-HFDISHLFHKWMKQKSSDKMIKIEI---------------------TNSNTQNVINALSVLR- 188

  Fly   546 IGHGTLNSQQHGDADIHQIMLTNNRSDQYVHHRSNHDSTWRKDKWTNNCYKLHQRCCRNQLDVAF 610
                        :|....:|:....:               ....|::|.    .||.....|.|
 Worm   189 ------------NAPNFDVMVFQPNT---------------VTAGTSDCV----GCCVIPFYVNF 222

  Fly   611 KSIKGFEFILQPKVFDAGYCHGR-CPPRHNPAHH--HALLQSLIWQEDHKRAPRPCCTPS---KL 669
            ..|...::||.|..|.|..|... |....:..:.  .|.:..|         |.|.|.|:   .:
 Worm   223 TEIGWNDWILSPPGFYANVCSDTVCSTESDEVYQFMKAAISDL---------PEPKCAPNYYGSV 278

  Fly   670 EMLEILHVDENHSDKLKISTWSDMQVVECACS 701
            :|:..|...:....::     ..::.:.|:|:
 Worm   279 DMIVALSPRDIRKTRV-----HGLRALSCSCT 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mavNP_524626.1 TGFb_propeptide <438..518 CDD:480997 12/85 (14%)
TGF_beta_maverick 598..700 CDD:381633 21/107 (20%)
tig-3NP_001391131.1 TGF_beta_INHB 213..304 CDD:381630 21/104 (20%)

Return to query results.
Submit another query.