DRSC/TRiP Functional Genomics Resources

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Protein Alignment mav and GDF9

DIOPT Version :9

Sequence 1:NP_524626.1 Gene:mav / 43804 FlyBaseID:FBgn0039914 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_005251.1 Gene:GDF9 / 2661 HGNCID:4224 Length:454 Species:Homo sapiens


Alignment Length:456 Identity:89/456 - (19%)
Similarity:156/456 - (34%) Gaps:150/456 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 TRDLHFLS------ITTNGFNDISNKRLRHR-RSLKKINRLNQNPKKHQNYGDLLRGEQDTMNIL 367
            :|.||::.      .|..|....:...|.:. |......|..|.|      ||.:.|...::.:|
Human    83 SRALHYMKKLYKTYATKEGIPKSNRSHLYNTVRLFTPCTRHKQAP------GDQVTGILPSVELL 141

  Fly   368 LHFPLTNAQDANFHHDKID--EANVRLMLLYSSSLATNFRRGPGSRKNKISQISGNDNIERHCNF 430
                        |:.|:|.  |..::.:|||                |..:.:|.:..::..||.
Human   142 ------------FNLDRITTVEHLLKSVLLY----------------NINNSVSFSSAVKCVCNL 178

  Fly   431 GDVNLNQSNKNSSQQLTLKVYQLLSANRRRKITSRKIEFGNVGFQETRTQWIEFDVTKAVRSWL- 494
                :.:..|:||:.|....|..        ..:.:.|||.      :.:||:.|||..::..: 
Human   179 ----MIKEPKSSSRTLGRAPYSF--------TFNSQFEFGK------KHKWIQIDVTSLLQPLVA 225

  Fly   495 -NKSHENLGIEIQC--DKCKSIGAR---------------ILSDFS---------------PSTP 526
             ||...::.|...|  |:.:...|:               .|:|.|               ||..
Human   226 SNKRSIHMSINFTCMKDQLEHPSAQNGLFNMTLVSPSLILYLNDTSAQAYHSWYSLHYKRRPSQG 290

  Fly   527 PRSTASSDEHLNLMPVLNIIGHGTLNSQQHGDADIHQIMLTNNRSDQYVHHRS------------ 579
            |    ..:..|:..||              |:.     ...:.||..:.|.|.            
Human   291 P----DQERSLSAYPV--------------GEE-----AAEDGRSSHHRHRRGQETVSSELKKPL 332

  Fly   580 -----NHDSTWRKDKWTNNCYKLHQRCCRNQLDVAFKSIKGFEFILQPKVFDAGYCHGRCPPRHN 639
                 |....:|:.....|..:||      ...::|..:|...:|:.|..::..||.|.||  ..
Human   333 GPASFNLSEYFRQFLLPQNECELH------DFRLSFSQLKWDNWIVAPHRYNPRYCKGDCP--RA 389

  Fly   640 PAHH-----HALLQSLIWQEDHKRAPRPCCTPSKLEMLEILHVDENHSDKLKISTWSDMQVVECA 699
            ..|.     |.::|::|:::.....|||.|.|:|...|.:|.::.:.|  :....:.||...:|.
Human   390 VGHRYGSPVHTMVQNIIYEKLDSSVPRPSCVPAKYSPLSVLTIEPDGS--IAYKEYEDMIATKCT 452

  Fly   700 C 700
            |
Human   453 C 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mavNP_524626.1 TGFb_propeptide <442..506 CDD:279078 15/65 (23%)
TGF_beta 599..700 CDD:278448 25/105 (24%)
GDF9NP_005251.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..330 5/31 (16%)
TGF_beta 353..453 CDD:306518 27/109 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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