DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mav and Bmp3

DIOPT Version :9

Sequence 1:NP_524626.1 Gene:mav / 43804 FlyBaseID:FBgn0039914 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_058801.1 Gene:Bmp3 / 25667 RGDID:2212 Length:468 Species:Rattus norvegicus


Alignment Length:445 Identity:98/445 - (22%)
Similarity:145/445 - (32%) Gaps:156/445 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   382 HDKIDEANVRLMLLYSSSLATNFRRGPGSRKNKISQISGNDNIERHCNFGDVNLNQSNKNSSQQL 446
            |||:.|..:.|...||.|......|.|||:......:.|.:.:.        :...:...:.|:.
  Rat    53 HDKVSEHMLWLYDRYSGSNRAQATRTPGSQLPGPQPLRGGNTVR--------SFRAAAAGTLQRK 109

  Fly   447 TLKVYQLLSANRRRKITSRKIEF-------GNVGFQETR---------------TQW-------- 481
            .|..:.|.|..:...|.|..:.|       .:|...|::               :.|        
  Rat   110 GLHTFNLTSLTKSENILSATLYFYIGELVNTSVNCPESQGCSHDSQRQHIQIDLSAWTLQSNQSQ 174

  Fly   482 ----IEFDVTKAVR---SWLNKSHENLGIEIQCDKCKSIGARILS-------------------- 519
                :..|..|..|   |||:|....|..:.:.|:...||..|.|                    
  Rat   175 LLGHLSVDTAKPYRDSMSWLSKDITQLLRKAKQDEEFLIGFNITSRAHELPKRMLLFPEPYILVY 239

  Fly   520 --------------------DFSPSTPPRSTASSDEHLN-----------LMPVLNIIGHGTLNS 553
                                ||:..|.||..:...|.|:           |:|:.|....|.  .
  Rat   240 ANDAAICEPESVVSSLQRHRDFTAGTVPRLDSHVREALSVERRKKRSTGILLPLQNNELPGA--E 302

  Fly   554 QQHGDADI----------------------------HQIMLTNNRSDQYVHHRSNHDSTWRKDKW 590
            .|:.:|.:                            ||...|....:|.:...       |:.:|
  Rat   303 YQYKEAGVWEERKPYKSLQTQPPEKSRSKKKQRKGPHQKGQTLQFDEQTLKKA-------RRKQW 360

  Fly   591 TNNCYKLHQRCCRNQLDVAFKSIKGFEFILQPKVFDAGYCHGRCP---PRHNPAHHHALLQSLIW 652
            ..     .:.|.|..|.|.|..|...|:|:.||.|||.||.|.|.   |:.....:||.:||:: 
  Rat   361 IE-----PRNCARRYLKVDFADIGWSEWIISPKSFDAYYCSGACQFPMPKSLKPSNHATIQSIV- 419

  Fly   653 QEDHKRA-------PRPCCTPSKLEMLEILHVDENHSDKLKISTWSDMQVVECAC 700
                 ||       |.|||.|.|:..|.||..|||.:..||:  :.:|.|..|||
  Rat   420 -----RAVGVVSGIPEPCCVPEKMSSLSILFFDENKNVVLKV--YPNMTVDSCAC 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mavNP_524626.1 TGFb_propeptide <442..506 CDD:279078 18/100 (18%)
TGF_beta 599..700 CDD:278448 41/110 (37%)
Bmp3NP_058801.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..53 98/445 (22%)
TGFb_propeptide 46..>203 CDD:279078 31/157 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 72..93 5/20 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 316..349 3/32 (9%)
TGF_beta 364..467 CDD:278448 41/110 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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