DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mav and Gdf6

DIOPT Version :9

Sequence 1:NP_524626.1 Gene:mav / 43804 FlyBaseID:FBgn0039914 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_038554.1 Gene:Gdf6 / 242316 MGIID:95689 Length:454 Species:Mus musculus


Alignment Length:540 Identity:110/540 - (20%)
Similarity:178/540 - (32%) Gaps:171/540 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 INTVPIQSRQTRETRDIG--LETKRHSKPSKRVD-ETRLKHLVLKGLGIKKL------------P 267
            |::....|.:...|:|:|  .|.|....|.:..: .|..:|    ||..|.|            |
Mouse    28 ISSSSSSSTELDSTKDVGNRKEGKMQRTPQESAEGRTPPEH----GLRQKDLRRRPPGQHQGQEP 88

  Fly   268 DMRKVNISQAEYS-SKYIEYLSRLRSNQEK---GNSYFNNFMGASFTRDLHFLSITTNGFNDISN 328
            ..|.:.:...||. |.|..|     |..||   ..|:|.:...|:     ...|....|.:|:|:
Mouse    89 PGRGLRVVPHEYMLSIYKTY-----SIAEKLGINASFFQSSKSAN-----TITSFVDRGLDDLSH 143

  Fly   329 KRLRHRRSLKKINRLNQNPKKHQNYGDLLRGEQDTMNILLHFPLTNAQDANFHHDKIDEANVRLM 393
            ..||.::.|..::.|:                                      ||.:.....|.
Mouse   144 TPLRRQKYLFDVSTLS--------------------------------------DKEELVGAELR 170

  Fly   394 LLYSSSLATNFRRGPGSRKNKISQISGNDNIERHCNFGDVNLNQSNKNSSQQLTLKVYQLLSANR 458
            |         :|:.|.:....                           .::.|.|:::..||.  
Mouse   171 L---------YRQAPPTPWGL---------------------------PARPLHLQLFPCLSP-- 197

  Fly   459 RRKITSRKIEFGNVGFQETRTQWIEFDVTKAVR--SWLNKSHENLGIEIQCD----KCKSIGARI 517
             ..:.:|.::...    .|:..|..|||.:.:|  .|     :.|.:|::..    .....|||.
Mouse   198 -LLLDARTLDPQG----PTQAGWEVFDVWQGLRPQPW-----KQLCLELRAAWGELDAGDTGARA 252

  Fly   518 LSDFSPS-------------TPPRSTA-----SSDEHLNLMPVLNIIGHGTLNSQQ--------- 555
            .....|.             .||:..|     :..:..||...:    |..|.|.:         
Mouse   253 RGPQQPPPLDLRSLGFGRRVRPPQERALLVVFTRSQRKNLFTEM----HEQLGSAEAAGAEGSWP 313

  Fly   556 --HGDADIHQIMLTNNRSDQYVHHRSNHDSTWRKDKWTNNCYKLHQRCCRNQLDVAFKSIKGFEF 618
              .|..|....:.:..|..:.....|.|.....|        |...||.|..|.|.||.:...::
Mouse   314 APSGSPDAGSWLPSPGRRRRRTAFASRHGKRHGK--------KSRLRCSRKPLHVNFKELGWDDW 370

  Fly   619 ILQPKVFDAGYCHGRC--PPR-HNPAHHHALLQSLIWQEDHKRAPRPCCTPSKLEMLEILHVDEN 680
            |:.|..::|.:|.|.|  |.| |....:||::|:|:...|....|..||.|:||..:.||::|..
Mouse   371 IIAPLEYEAYHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPGSTPPSCCVPTKLTPISILYIDAG 435

  Fly   681 HSDKLKISTWSDMQVVECAC 700
            ::...|  .:.||.|..|.|
Mouse   436 NNVVYK--QYEDMVVESCGC 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mavNP_524626.1 TGFb_propeptide <442..506 CDD:279078 14/65 (22%)
TGF_beta 599..700 CDD:278448 35/103 (34%)
Gdf6NP_038554.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..93 16/68 (24%)
TGFb_propeptide 75..284 CDD:279078 49/304 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 247..268 4/20 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..350 7/54 (13%)
TGF_beta 352..453 CDD:278448 35/102 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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