DRSC/TRiP Functional Genomics Resources

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Protein Alignment mav and gdf15

DIOPT Version :9

Sequence 1:NP_524626.1 Gene:mav / 43804 FlyBaseID:FBgn0039914 Length:701 Species:Drosophila melanogaster
Sequence 2:XP_017946434.1 Gene:gdf15 / 101733328 XenbaseID:XB-GENE-5714902 Length:377 Species:Xenopus tropicalis


Alignment Length:470 Identity:90/470 - (19%)
Similarity:171/470 - (36%) Gaps:123/470 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 GLETKRHSKPSKRVDETRLKHLVLKGLGIKKLPDMR-KVNISQ-AEYSSKYIEYLSRLRSNQEKG 297
            |::.:...:..|::....:|..:|..||:...|.:| |:::.. .:..|.|.|.|:.||.|..|.
 Frog    28 GVQLRPLVEKEKKMQLEAVKKGILDHLGLNSPPVIREKLDLDDIRKMYSLYQEKLTELRGNISKD 92

  Fly   298 NSYFNNFMGASFTRDLHFLSITTNGFNDISNKRLRHRRSLKKINRLNQNPKKHQNYGDLLRGEQD 362
            ...         .|.:|.|:.|           |..:..|.:...:......|:           
 Frog    93 GIP---------ERKVHLLTPT-----------LEKKTQLARKYEIQHGSNSHR----------- 126

  Fly   363 TMNILLHFPLTNAQDANFHHD-KIDEANVRLMLLYSSSLATNFRRGPGSRKNKISQISGNDNIER 426
                   :.|..::...||.: .:..|.::|.....|:|     :..||                
 Frog   127 -------YNLVFSRTQTFHQELSVMRAELKLCKKILSTL-----QSVGS---------------- 163

  Fly   427 HCNFGDVNLNQSNKNSSQQLTLKVYQLLSANRRRKITSRKIEFGNVGFQETRTQWIEFDVTKAVR 491
                          ||:.|..:.:|:::.:|.|......|:.......:||    :..:|..||:
 Frog   164 --------------NSTAQPMVNIYKVVESNERHGEEEHKLLDSKPLDKET----LMLNVVSAVQ 210

  Fly   492 SWLNKSHENLGIEIQCDKCKSIGARILSDFSPSTPPRSTASSDEHLNLMPVLNIIGHGTLNSQQH 556
            .|:..|          :||..:...|.:|.:                      .:.:|....:::
 Frog   211 QWVASS----------EKCLRLELVIPTDIA----------------------FVSNGDKQKEKN 243

  Fly   557 GDADIHQIMLTNNRSDQYVHHRSNHDSTWRKDKWTNNCYKLHQRCCRNQLDVAFKSIKGFEFILQ 621
            .|      ::....:.:..|.......:...|:   .|.|..::|||..|.|:||.|...::|:.
 Frog   244 DD------LILEVETQERAHSNIRKSRSLPADE---ECKKSEKKCCRKSLRVSFKEIGWSDWIIV 299

  Fly   622 PKVFDAGYCHGRCPPRHNPAHHHALLQSLIWQEDHKRAPRPCCTPSKLEMLEILHVDENHSDKLK 686
            |:.:...:|.|.||..:.||..||.::..:....:...|.|||.|:..|.:.::|.  |...||.
 Frog   300 PEAYTMHFCDGSCPHNYKPASMHAQIKYRMHHISNGATPAPCCVPASYEPMVLMHY--NTEGKLT 362

  Fly   687 ISTWSDMQVVECACS 701
            ::.:.||.|.:|.|:
 Frog   363 LTPFEDMIVRKCHCA 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mavNP_524626.1 TGFb_propeptide <442..506 CDD:279078 13/63 (21%)
TGF_beta 599..700 CDD:278448 32/100 (32%)
gdf15XP_017946434.1 TGFb_propeptide 43..240 CDD:366248 50/305 (16%)
TGF_beta_GDF15 277..377 CDD:381646 32/101 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D338011at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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