DRSC/TRiP Functional Genomics Resources

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Protein Alignment mav and tgfb1

DIOPT Version :9

Sequence 1:NP_524626.1 Gene:mav / 43804 FlyBaseID:FBgn0039914 Length:701 Species:Drosophila melanogaster
Sequence 2:XP_002939433.1 Gene:tgfb1 / 100498430 XenbaseID:XB-GENE-488111 Length:381 Species:Xenopus tropicalis


Alignment Length:394 Identity:92/394 - (23%)
Similarity:148/394 - (37%) Gaps:98/394 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 DLLRGEQDTMNILLHFPLTNAQDANFHHDKIDEANVRL----MLLYSSSLATNFRRGPGS----- 410
            :.:||:     ||....|....|       :|..|:.:    :.||:|:|.....|....     
 Frog    39 EAIRGQ-----ILSKLKLDRTPD-------VDSENMTVPSEAISLYNSTLEVIRERAAKEEAPVW 91

  Fly   411 --------------RKNKISQISGNDNIERHCNFGDVNLNQSNKNSSQQLTLKVYQLLSANRRRK 461
                          |...|:::..|:.:... |...|..|...|:......|::|       |:|
 Frog    92 QEHNIQDYYAKQVHRFESINELKENEFLFTF-NASHVRENVGMKSLLHHAELRMY-------RKK 148

  Fly   462 ITSRKIE------FGN----VGFQE-------TRTQWIEFDVTKAVRSWLNKSHENLGIEIQ--C 507
            .|.:.:|      .||    .|:.:       |..:|:.|||||.|..|||.:.||....::  |
 Frog   149 QTDKNVEQRMELYAGNGTDYSGYLDSKFFTAVTDDEWVSFDVTKTVNEWLNHAEENEEFRLKPAC 213

  Fly   508 DKCKSIGARILSDFSPSTPPRSTASSDEHLNLMPVLNIIGHGTLNSQQHGDADIHQIMLTN---N 569
             ||             |....|...|.|..:::       .|.|.:....|.....:::|:   .
 Frog   214 -KC-------------SITTHSKVISIEGFSIL-------RGDLMNLGGDDLKKPYLLITSMPAE 257

  Fly   570 RSDQYVHHRSNHDSTWRKDKWTNNCY-KLHQRCCRNQLDVAFKSIKGFEFILQPKVFDAGYCHGR 633
            |.|...|.|.      ::......|: .....||...|.:.|:...|:::|.:||.::|.||.|.
 Frog   258 RIDTVSHSRR------KRGVGQEYCFGNSGPNCCVKPLYINFRKDLGWKWIHEPKGYEANYCLGN 316

  Fly   634 CPPRHNPAHHHALLQSLIWQEDHKRAPRPCCTPSKLEMLEIL-HVDENHSDKLKISTWSDMQVVE 697
            ||...:....::.:.||..|.:...:..|||.|..||.|.|: :|..|    .|:...|:|.|..
 Frog   317 CPYIWSTDTQYSKVLSLYNQNNPGASISPCCVPDVLEPLPIIYYVGRN----AKVEQLSNMVVRS 377

  Fly   698 CACS 701
            |.||
 Frog   378 CHCS 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mavNP_524626.1 TGFb_propeptide <442..506 CDD:279078 22/80 (28%)
TGF_beta 599..700 CDD:278448 32/101 (32%)
tgfb1XP_002939433.1 TGFb_propeptide 22..250 CDD:366248 52/251 (21%)
TGF_beta_TGFB1 283..381 CDD:381654 32/101 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1343
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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