DRSC/TRiP Functional Genomics Resources

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Protein Alignment mav and gdf5

DIOPT Version :9

Sequence 1:NP_524626.1 Gene:mav / 43804 FlyBaseID:FBgn0039914 Length:701 Species:Drosophila melanogaster
Sequence 2:XP_002662587.1 Gene:gdf5 / 100334210 ZFINID:ZDB-GENE-990415-39 Length:474 Species:Danio rerio


Alignment Length:409 Identity:85/409 - (20%)
Similarity:150/409 - (36%) Gaps:103/409 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   333 HRRSLKKINRLNQNPKKHQNYGDLLRGEQDTMNILLHFPLTNAQDANFHHDKIDEANVRLMLLYS 397
            |.|....:...|....||.     |....|.| :.|::.||:             .:|...:|:.
Zfish   127 HLRMKSAVKLENSEEPKHP-----LVIPHDYM-LSLYWSLTS-------------GDVNTSVLHE 172

  Fly   398 SSLA---TNF-RRGPGSRKNKISQISGNDNIERHCNFGDVNLNQSNKNSSQQLTLKVYQLLSANR 458
            :.:|   |:| .||...|...:.:       :|:.    .|::...|.......|::.      |
Zfish   173 AGMANTITSFVDRGQDERAPLLRR-------QRYV----FNISSMEKEGLLGAELRIL------R 220

  Fly   459 RRKITSRKIEFGNVGFQETR------------------------TQWIEFDVTKAVRSWLNKSHE 499
            ::.:.|||..|.. |....|                        :.|..||:.|..:::.|.  .
Zfish   221 KKHMDSRKATFSE-GMAVLRLFTCASGKNAAVLLQARPFDSHSASYWEVFDIWKVFKNFRNT--P 282

  Fly   500 NLGIEIQC-DKCKSIGARILSDFSPSTPPRSTASSDEHLNLMPVLNIIG--------HGTLNSQQ 555
            .|.:|:.. |..:.:..|:|   ..|...|.|...       ....:.|        :..:.::.
Zfish   283 QLCLELDAVDHGRPLDLRLL---GLSRAGRQTKEK-------AFFVVFGRTKKRGLFYNEIKARS 337

  Fly   556 -HGDADIHQIMLTNNRSDQYVHHRSNHDSTWRKDKWTNNCYKLHQRCCRNQLDVAFKSIKGFEFI 619
             |.:..:::.:.|..|..:....|........|           |||.|.||.|.||.:...::|
Zfish   338 GHDNKTVYEYLFTQRRMRRAPLPRGKKPIKNPK-----------QRCNRKQLHVNFKEMGWDDWI 391

  Fly   620 LQPKVFDAGYCHGRC--PPR-HNPAHHHALLQSLIWQEDHKRAPRPCCTPSKLEMLEILHVDENH 681
            :.|..::|.:|.|.|  |.| |....:||::|:|:...|.:..|..||.|::|..:.||::|.  
Zfish   392 IAPLEYEAFHCDGVCDFPIRSHLEPTNHAIIQTLMNSMDPRSTPPTCCVPTRLSPISILYIDS-- 454

  Fly   682 SDKLKISTWSDMQVVECAC 700
            ::.:....:.||.|..|.|
Zfish   455 ANNVVYKQYEDMVVESCGC 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mavNP_524626.1 TGFb_propeptide <442..506 CDD:279078 15/87 (17%)
TGF_beta 599..700 CDD:278448 35/103 (34%)
gdf5XP_002662587.1 TGFb_propeptide 138..320 CDD:279078 41/230 (18%)
TGF_beta 371..473 CDD:278448 35/103 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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